Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g02118 ATGGGCCAGTCTGCTTCGACGGCCGCAATCGCTAGCCGTCGTGAATCCTCTCACAGCCATTGGTCCAAGACTAAATCAACGGCCTTGGTTTCTCCGATGCTTGCCGACGACAACGACGACTCCCGTCATGAGGGAATCGATGGAACCCTTGACTATATCTCTCATCTTCCTGATGAGTGTTTGGCTAGCATCTTCCAGTCGCTCAGCTCCGCCGACCGCAATCGCTGCTCACTCGTTTGCCTACGCTGGCTGCGGGTCGAGGGCCAGAGCCGTCACCGTCTCTCCCTTAACGCTCAATCAgatcttcttcttgttgtcccctctcttttctctcgTTTCGATTCTGTTACAAAACTCGCCTTGAAATGCGACCGCAGATCCATTAGCATTGGCGACGACGCGCTTGTTCTCATCTCCGAACGATGCCCTAATCTGACTCGCCTAAAACTCCGTGCCTGCCGTGAACTTACCGATGCTGGCATGGAGGGCTTTGCCAAAAATTGCAAGGGTTTGAAGAAACTTTCCTGTGGATCTTGCACTTTTGGAAGCAAGGGCATGAACGCGGTGCTAGATAATTGTCCCGCTCTCGAAGAATTATCTGTGAAGCGTCTCAGAGGAATTACGGATGGGGCTGCTGCCGAGCCGATTGGACCTGGTATTGCAGGGTCGTCCCTCAAAACGATTTGCTTAAAGGAGCTTTATAACGGACAGGGTTTCGGGTCGCTTATTCTGGGCTCAAAGAATTTAAGGACATTGAAGCTTTTCAGGTGCTCTGGCGATTGGGACAAGCTTTTTCAAGCTATGGCAGATAAAGTTACAAGTCTTGTTGAAGTCCACCTCGAGAGGCTACAGATTAGTGATATTGGACTAACAGCTATCTCAAATTGTTCGAGTCTGGAAATTTTGCATCTTGTCAAGACCCCAGAGTGCACGGACTTGGGACTTATCTCAATTGCGGAACGCTGTAAACTGCTAAGGAAACTTCATATAGATGGATGGAAGACAAATCGTATAGGTGATGAAGGTTTAACAGCAGTTGCTAAATATTGTCCAAATCTTCAGGAATTAGTTCTTATCGGTGTGAATCCCACTACAGCGAGTTTGGAAATGTTGGCTTCCAACTGCCAGAATCTAGAGAGACTGGCGTTATGTGGAAGTGATACAGTAGGTGATGCTGAAATATCATGCATTGCATCAAAATGTGTAGCATTGAAAAAACTCTGTATTAAGAGTTGCCCCGTCTCTGATCAAGGAATGGAAGCGCTAGCAGGTGGATGCCCGAATTTGGTGAAAGTGAAGGTTAAGAAATGTAAAGGTGTAACCTCGGAGGGAGCAGATTGGTTGAGGTTGAGTAGGGGATCACTTGCTGTTAATTTAGATACTGGAGAAGCAGAACATCTGGACGCAAGTGCTAGTGATGGTGGAGTACAGGATAACGGCCCGGAATTTCCTTCAATTCCTAGCCAAATAGCAGCTTCGGCCTCTATTGCATCAAGCAGTACCAGTCGATCAACTTCATTCAAGTCAAGGTTAGGACTGTTGTCTGGGAGGAGTTTAGTGGCTTGCACTTTGAGACGGTGGGCAGGTGGTCACAATAACTCTCGGAATGGTTA 1613 0.4675 MGQSASTAAIASRRESSHSHWSKTKSTALVSPMLADDNDDSRHEGIDGTLDYISHLPDECLASIFQSLSSADRNRCSLVCLRWLRVEGQSRHRLSLNAQSDLLLVVPSLFSRFDSVTKLALKCDRRSISIGDDALVLISERCPNLTRLKLRACRELTDAGMEGFAKNCKGLKKLSCGSCTFGSKGMNAVLDNCPALEELSVKRLRGITDGAAAEPIGPGIAGSSLKTICLKELYNGQGFGSLILGSKNLRTLKLFRCSGDWDKLFQAMADKVTSLVEVHLERLQISDIGLTAISNCSSLEILHLVKTPECTDLGLISIAERCKLLRKLHIDGWKTNRIGDEGLTAVAKYCPNLQELVLIGVNPTTASLEMLASNCQNLERLALCGSDTVGDAEISCIASKCVALKKLCIKSCPVSDQGMEALAGGCPNLVKVKVKKCKGVTSEGADWLRLSRGSLAVNLDTGEAEHLDASASDGGVQDNGPEFPSIPSQIAASASIASSSTSRSTSFKSRLGLLSGRSLVACTLRRWAGGHNNSRNG 537
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g02118 537 Gene3D - 52 91 - -
Bva06g02118 537 MobiDBLite consensus disorder prediction 1 25 - -
Bva06g02118 537 SUPERFAMILY F-box domain 47 86 IPR036047 GO:0005515
Bva06g02118 537 MobiDBLite consensus disorder prediction 1 15 - -
Bva06g02118 537 Pfam F-box-like 53 86 IPR001810 GO:0005515
Bva06g02118 537 PANTHER F-BOX PROTEIN SKIP2 34 485 - -
Bva06g02118 537 Gene3D Ribonuclease Inhibitor 96 216 IPR032675 -
Bva06g02118 537 Gene3D Ribonuclease Inhibitor 218 478 IPR032675 -
Bva06g02118 537 PANTHER UNCHARACTERIZED 34 485 - -
Bva06g02118 537 Pfam Leucine Rich repeat 404 423 IPR001611 GO:0005515
Bva06g02118 537 Pfam Leucine Rich repeat 142 165 IPR001611 GO:0005515
Bva06g02118 537 SUPERFAMILY RNI-like 98 451 - -
Bva06g02118 537 SMART LRR_CC_2 375 400 IPR006553 -
Bva06g02118 537 SMART LRR_CC_2 142 167 IPR006553 -
Bva06g02118 537 SMART LRR_CC_2 401 425 IPR006553 -
Bva06g02118 537 SMART LRR_CC_2 193 231 IPR006553 -
Bva06g02118 537 SMART LRR_CC_2 168 192 IPR006553 -
Bva06g02118 537 SMART LRR_CC_2 426 453 IPR006553 -
Bva06g02118 537 SMART LRR_CC_2 296 321 IPR006553 -
Bva06g02118 537 SMART LRR_CC_2 322 349 IPR006553 -
Bva06g02118 537 SMART LRR_CC_2 350 374 IPR006553 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g02118 Bva-Chr6 14009148 14011136 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g02118 - - gmx:100788163 808.52
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g02118 06 14009148 14011136 Bva06g02118 06 14009148 14011136 ECH