Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g02117 ATGGACTATCTAGGGATTGATCTGAGCTGTGCTCTTGGATCTTTCCGCCATGGCCAATTTCCGGAGAAGGATTGTTTGCTTCCTCTTATTTCCAAACTCCTCGGCTACGCCATCGTCGCCGCTTCCACCACTGTCAAACTCCCCCAGattttaaaaattttgaagcataGAAGTGTCAGAGGTCTGAGCATGATATCCTTTGAGCTTGAAGTTGTTGGCTACACCATAGCATTAGCTTACTGTCTTCACAAAGGGCTTCCATTTTCAGCTTACGGGGaactattatttcttttaatccaAGCCTTGGTTTTGGTTGCCATAATCTACTACTTTTCTCAACCCGTGAGTACGAAGACATGGATCCGGGCATTGCTATATTGTGCTGTGGCACCCACCATCCTAGCAGGCAATATTAATCCTCTTCTCTTTGAAGCTCTCTATGCTTCTCAACATGCAATTTTTCTCTTCGCCAGGATCCCACAAATATGGGCAAACTTCTCTAATAAAAGTACAGGAGAGCTCAGCTTCTTAACCTGTTTCATGAACTCTGGAGGTTCAATGGTTAGAGTCTTCACTAGTATCCAAGAAAATGCGCCAAAAAGTGTCTTGATGGGCTCCATAATTGGAATCGCGACAAATTTTACTATCTTAAGTCAGATAGTGTTTTACCAAAAGCCCCGGGCTGGAAAAGACAAGAAACTGCAGTA 707 0.4215 MDYLGIDLSCALGSFRHGQFPEKDCLLPLISKLLGYAIVAASTTVKLPQILKILKHRSVRGLSMISFELEVVGYTIALAYCLHKGLPFSAYGELLFLLIQALVLVAIIYYFSQPVSTKTWIRALLYCAVAPTILAGNINPLLFEALYASQHAIFLFARIPQIWANFSNKSTGELSFLTCFMNSGGSMVRVFTSIQENAPKSVLMGSIIGIATNFTILSQIVFYQKPRAGKDKKLQ 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g02117 235 Gene3D - 29 113 - -
Bva06g02117 235 PIRSF Mpdu1 8 235 IPR016817 -
Bva06g02117 235 SMART ctns 156 187 IPR006603 -
Bva06g02117 235 SMART ctns 44 75 IPR006603 -
Bva06g02117 235 Gene3D - 149 233 - -
Bva06g02117 235 PANTHER MANNOSE-P-DOLICHOL UTILIZATION DEFECT 1 LEC35 -RELATED 2 225 IPR016817 -
Bva06g02117 235 PANTHER MANNOSE-P-DOLICHOL UTILIZATION DEFECT 1 PROTEIN HOMOLOG 1 2 225 - -
Bva06g02117 235 Pfam PQ loop repeat 151 201 IPR006603 -
Bva06g02117 235 Pfam PQ loop repeat 30 89 IPR006603 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g02117 Bva-Chr6 14004604 14007351 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g02117 1 223 Miscellaneous Gene Families AT4G07390 77.130 1.47e-129 363
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g02117 K09660 - gmx:100787632 399.823
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g02117 06 14004604 14007351 Bva06g02117 06 14004604 14007351 ECH