LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Bva06g02111	atgtcgGGTGGAATCGCGCGCGGTCGTCTTACGGAGGAGCGGAAAGCATGGCGTAAGAATCATCCTCATGGTTTCGTGGCGAAGCCGGAAAGTGGACCCGACGGCTCTGTGAATTTGATGGTGTGGCAGTGCATCATCCCTGGCAAGGCTGCAACTGACTGGGAGGGAGGCTACTATCCGCTTACTCTTCACTTTTCTGAAGATTACCCCAGCAAGCCTCCAAAGTGTAAATTTCCTCAAGGGTTCTTCCATCCTAATGTCTATCCTTCTGGAACAGTATGCTTGTCAATCCTTAATGAGGACAGCGGTTGGAGACCAGCCATTACTGTAAAGCAAATTCTCGTGGGGATTCAAGATTTGCTGGACCAACCAAACCCTGCTGATCCTGCACAAACTGAAGGATACCAGCTTTTCATTCAGGATCCTACTGAATATAGGAGAAGGGTGCGACTTCAGGCTAAGCAATATCCACCCGTTCTTTA	482	0.4876	MSGGIARGRLTEERKAWRKNHPHGFVAKPESGPDGSVNLMVWQCIIPGKAATDWEGGYYPLTLHFSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSILNEDSGWRPAITVKQILVGIQDLLDQPNPADPAQTEGYQLFIQDPTEYRRRVRLQAKQYPPVL	160

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Bva06g02111	160	PANTHER	UBIQUITIN-CONJUGATING ENZYME E2	3	158	-	-
	Bva06g02111	160	SMART	ubc_7	8	158	-	-
	Bva06g02111	160	Pfam	Ubiquitin-conjugating enzyme	9	151	IPR000608	-
	Bva06g02111	160	Gene3D	Ubiquitin Conjugating Enzyme	1	158	IPR016135	-
	Bva06g02111	160	ProSiteProfiles	Ubiquitin-conjugating (UBC) core domain profile.	5	158	IPR000608	-
	Bva06g02111	160	PANTHER	-	3	158	-	-
	Bva06g02111	160	ProSitePatterns	Ubiquitin-conjugating (UBC) active site signature.	83	98	IPR023313	-
	Bva06g02111	160	CDD	UBCc	9	153	IPR000608	-
	Bva06g02111	160	SUPERFAMILY	UBC-like	5	156	IPR016135	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Bva06g02111	Bva-Chr6	13970480	13972834	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Bva06g02111	6	158	Miscellaneous Gene Families	AT3G17000	28.205	1.17e-10	56.6

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Bva06g02111	K10577		-	cpap:110818903	322.783

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Bva06g02111	06	13970480	13972834	Bva06g02111	06	13970480	13972834	ECH