Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g02101 atgacaagGAATTTCCCTCCATCTGCCACATCGCCACTCGTGAATGACAGAACCTCTTTGGAGTCTGGAGGCAATCTCCTCCTTCGTTGTCCCTGCAGATCTATCTACATGGCTCTTCCTCACCACCAATTCCAACAACACTACCAACCCCAATCAGAACAACCACAATCAAAACGTTTTAGAAGTTTACAAACAGTTGATGCGCAGATGACGCAGCCCGTTGCCTACTACAACCTCAATGATTTACAAGCTCATCATCCTCCGTACATTCCTCCCtTTCATGTTGTTGGGTTTGCACCTGGTCCAGTTCCTGCTGCTGACGGCAGCGATGGCGGAGCTGAATTGCAATGGAATTATGGTTTGGAATCCGAAAGAAAAAGGCTAAAGGAACAGGATTTTCTGGAGAACAACTCTCAGATATCTTCGGTAGATTTCCTGCAACCACGGTCAGTCTCCACAGGATTAGGTTTGTCACTTGACAATACCCGCGTGGCTTCCACTGGAAACTCGGCTTTATTGTCACTCATTGGTGACGACATTGATAGTGAGTTACAGCGTCAGGATGAAGAGCTTAATAGATTCCTTAAACTTCAGGGTGACAGATTACGGCAAACTATTTTAGATAAGGTTCAGGCAACACAAGTTCGGAGTATATCAATTATTGAAGACAAATTCCTTGAGAAACTTCGTGAGAAAGAAGCCGAGGTAGAAAACATCAATAAGAGGAATATGGAACTTGAAGAGCGAATGGAGCAATTGACTGTTGAAGCAGGTGCCTGGCAACAGCGAGCTAGATACAATGAGAACATGATAGCTGCTCTCAAGTATAATCTTCAGCAACTGTATATTCAAAGCAGAGACAGTAAAGAAGGATGTGGTGACAGTGAGGTAGATGATACGGCTTCTTGCTGTAATGGCGGCTTCATCGATTTTCACTTGCTCTCAATGGAGAACAATGATATGAAAGAGATGATGACATGTAAGGCTTGCAGAGTCAATGAAGCGAGCATGCTCTTATTCCCATGTAAACATCTTTGTCTCTGTAAGGACTGTGAAAGTAAGCTTAGTTTTTGCCCCCTGTGTCAATCCTCTAAATTCATTGGCATGGAGGTCTATATCATTCTCCCCGTGTCACCTTTTGCCTCATTTAAAGTGCCTCCACGCATATCAACAAAGATGTATCCCGCATCTTCAGAACAAAAGTA 1205 0.4349 MTRNFPPSATSPLVNDRTSLESGGNLLLRCPCRSIYMALPHHQFQQHYQPQSEQPQSKRFRSLQTVDAQMTQPVAYYNLNDLQAHHPPYIPPFHVVGFAPGPVPAADGSDGGAELQWNYGLESERKRLKEQDFLENNSQISSVDFLQPRSVSTGLGLSLDNTRVASTGNSALLSLIGDDIDSELQRQDEELNRFLKLQGDRLRQTILDKVQATQVRSISIIEDKFLEKLREKEAEVENINKRNMELEERMEQLTVEAGAWQQRARYNENMIAALKYNLQQLYIQSRDSKEGCGDSEVDDTASCCNGGFIDFHLLSMENNDMKEMMTCKACRVNEASMLLFPCKHLCLCKDCESKLSFCPLCQSSKFIGMEVYIILPVSPFASFKVPPRISTKMYPASSEQK 401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g02101 401 Coils Coil 222 263 - -
Bva06g02101 401 PANTHER SBP (S-RIBONUCLEASE BINDING PROTEIN) FAMILY PROTEIN 37 373 IPR017066 -
Bva06g02101 401 Pfam Zinc finger, C3HC4 type (RING finger) 325 363 - -
Bva06g02101 401 PANTHER F2G19.2 37 373 - -
Bva06g02101 401 ProSiteProfiles Zinc finger RING-type profile. 327 362 IPR001841 -
Bva06g02101 401 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 314 373 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g02101 Bva-Chr6 13924967 13927481 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g02101 327 363 Miscellaneous Gene Families AT2G21380 43.243 2.74e-06 47.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g02101 K19042 - gmx:100811918 556.214
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g02101 06 13924967 13927481 Bva06g02101 06 13924967 13927481 ECH