Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g02096 ATGACTGATGACCGAGTAGCAGTAGCAGTAGCAGTAAATGACATTGAAACGAACCATTCTTCCTGTGATGCCAAAACCATTTTTCTCAGTTCTCAGCTCCCTGCGATCGATGATGCTATTGCTAATGTGAGGAAGTTGCATGGACTGACAATGCCAGAGTTTCAAGAGCCAACGTCTTCGAGAGCAGGGTTGAGACCTCGCGATAGCAGCCCCGACTCCGTCATCTTCACACTTGAATCCAACTTCAGCCTCTTCTCCTCCGCTTCTGCTAGTGTCGATCGCTGCTCATTTACATCTGATGCTCGTGACCACGATTCTCTAGCTTCTGAAATCTCCCTGCATTTGGCAGGATATGACGGTGAATTTTCTCAGAACGAGAGTTGGAGTGGTCCAGATCCAGATCCAAACAAACAAGCAGACGCAATACATAACAAGCACAGTCGTCTCTCCAGCAccggggaaaaagaaaaagTTGTAAAGGAGGATAGTGATGCTGATAGTGAAGACGAAAATCAGCCTTTAGAATTGGATTCAGCCAGAAACTCTTTCTCTCTAGCTCTCAAAGAATGTCAGGATAGGAGATCGAGATCCGAAGCACTAATAAAGAGGCTGGACCGACGAAGACCTGCTTCATTAGATCTGAACAATGCGACGCTATCTTCACCTCGACTGGGGAGCATGAAGAAAGGCACGGTTTTGTCTCGGAGGTCTGGCACTTTTCATAGTCCGGGAACACCCAATTATCGGCAAGCTGGTGTTGCAATGCAAAAGGGCTGGTGCTCAGAGCGGGTGCCTTTGCATACAAATGCTACCAGGAAGCAAGTCAGTGCGGCTCTGTTGCCTTTCAACAATGGAAGAACATTGCCATCTAAATGGGAAGATGCCGAGAGATGGATTTTCAGTCCTGTTTCAGGAGATGATACGCTCAGGACTTCGGTTCGGCAACCTCAGAGGAGGCCAAAGTCAAAGAGTGGTCCACTTGGCCCCCCTGGTTTTGcttattattcattatattcACCGGCAATTCCAATGTTTGAAGGGGCAAATCCCGGGACTCCATTTTCAGCTGGTGTTATCTCAGCTGATGGATTAATAACCCGTTCCAGTGCTCATGATGGAGTTCTTTTGACGCGAACTTGCATGGCCCGCTCAGCTAGTGTGCATGGATGTACCGAGATGCAGAGTCAGTCACCATTGCCTTCCCAAGAGGAGAAATTGGACGGTTGCAAAGATGCGGCCACCAATGTATCTCGTGCTGTTTCAAGGAGAGACATGGCAACCCAGATGAGCCCAGAGGGTAGCACATGCTCCTCTCCCAATATGAGGCCTTCATTCTCTACCTCCACTCCGTCCACACTGCCCGTCACAGAAACACAGAGTGTCTCTTCCTCTAAGACGGATATCAGAGATGTGCAGGTAGATGAACGTGTGACTGTGACAAGATGGTCCAAGAAACATAGAGCCCTATTCTCTGGGAGAGGCTCAGAAATTGTTGagaattggaaaaagaaagaaataaatgctCGGCAATCAGCTTGGAACATCTCTGAAACGGCAAAGACTGTCTCAAAtGCTAAAAGGGAGGAAGTCAAAATCACTGCTTGGGAAAACTTGCAGAAGGCAAAAGCGGAGGCAGCAATACGGAAACTAGAGaTGAAGTTGGAAAAGAAGAGAGCATCTTCTATGGATAAGATTATGAACAAGCTGAGGTCGGCTCAAAAGAAAGCTCAGGAAATGAGAAACTCAGTCTTGGCCAACCAATCCCATCAAGTTGCCAGAACTTCCCACAAGGCTATTTTATTTCGTAGAACCAGCCAGATGGGCTCTTTGAGTGGTTGTTTCACCTGTCATGCTTTCTA 1859 0.4626 MTDDRVAVAVAVNDIETNHSSCDAKTIFLSSQLPAIDDAIANVRKLHGLTMPEFQEPTSSRAGLRPRDSSPDSVIFTLESNFSLFSSASASVDRCSFTSDARDHDSLASEISLHLAGYDGEFSQNESWSGPDPDPNKQADAIHNKHSRLSSTGEKEKVVKEDSDADSEDENQPLELDSARNSFSLALKECQDRRSRSEALIKRLDRRRPASLDLNNATLSSPRLGSMKKGTVLSRRSGTFHSPGTPNYRQAGVAMQKGWCSERVPLHTNATRKQVSAALLPFNNGRTLPSKWEDAERWIFSPVSGDDTLRTSVRQPQRRPKSKSGPLGPPGFAYYSLYSPAIPMFEGANPGTPFSAGVISADGLITRSSAHDGVLLTRTCMARSASVHGCTEMQSQSPLPSQEEKLDGCKDAATNVSRAVSRRDMATQMSPEGSTCSSPNMRPSFSTSTPSTLPVTETQSVSSSKTDIRDVQVDERVTVTRWSKKHRALFSGRGSEIVENWKKKEINARQSAWNISETAKTVSNAKREEVKITAWENLQKAKAEAAIRKLEMKLEKKRASSMDKIMNKLRSAQKKAQEMRNSVLANQSHQVARTSHKAILFRRTSQMGSLSGCFTCHAF 619
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g02096 619 Coils Coil 562 582 - -
Bva06g02096 619 MobiDBLite consensus disorder prediction 145 164 - -
Bva06g02096 619 MobiDBLite consensus disorder prediction 420 467 - -
Bva06g02096 619 MobiDBLite consensus disorder prediction 418 467 - -
Bva06g02096 619 Coils Coil 540 560 - -
Bva06g02096 619 MobiDBLite consensus disorder prediction 145 178 - -
Bva06g02096 619 Pfam Remorin, C-terminal region 505 607 IPR005516 -
Bva06g02096 619 PANTHER OS02G0116800 PROTEIN 132 617 - -
Bva06g02096 619 Coils Coil 187 207 - -
Bva06g02096 619 MobiDBLite consensus disorder prediction 306 327 - -
Bva06g02096 619 PANTHER REMORIN FAMILY PROTEIN 132 617 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g02096 Bva-Chr6 13892385 13896918 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g02096 - - zju:107420005 791.956
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g02096 06 13892385 13896918 Bva06g02096 06 13892385 13896918 ECH