Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g02078 ATGGCTATATTTGTAGCACGCGATGTGGGGGCTGATGGGAAGCATGTGATGAGCGTTGATGAGTTCAAACGCTGGTTGAACAGATTTGATACAAACAACGATGGTCGTATCAGCAAAGCTGAACTCCGGGAGGCCGTCCGCCAAACTGGAGCCCATTTCGCCACTTGGAAGACTAGCCGGGGCTTCAAGTCCGCAGATATCAATGGTGATGGTTTCATTGACAAAAACGAATTCAAAAACCTTGTGGACTTTGCAGAGAAGTATTTGAATATCATTGTTgtcaatttttg 290 0.4448 MAIFVARDVGADGKHVMSVDEFKRWLNRFDTNNDGRISKAELREAVRQTGAHFATWKTSRGFKSADINGDGFIDKNEFKNLVDFAEKYLNIIVVNF 96
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g02078 96 Gene3D - 11 94 - -
Bva06g02078 96 PANTHER CALCIUM BINDING PROTEIN 5 96 - -
Bva06g02078 96 SUPERFAMILY EF-hand 19 84 IPR011992 -
Bva06g02078 96 ProSitePatterns EF-hand calcium-binding domain. 66 78 IPR018247 -
Bva06g02078 96 ProSiteProfiles EF-hand calcium-binding domain profile. 62 88 IPR002048 GO:0005509
Bva06g02078 96 CDD EFh 21 82 IPR002048 GO:0005509
Bva06g02078 96 ProSiteProfiles EF-hand calcium-binding domain profile. 17 52 IPR002048 GO:0005509
Bva06g02078 96 SMART efh_1 21 49 IPR002048 GO:0005509
Bva06g02078 96 SMART efh_1 57 85 IPR002048 GO:0005509
Bva06g02078 96 Pfam EF-hand domain pair 27 81 IPR002048 GO:0005509
Bva06g02078 96 ProSitePatterns EF-hand calcium-binding domain. 30 42 IPR018247 -
Bva06g02078 96 PANTHER EF-HAND PAIR PROTEIN 5 96 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g02078 10 78 EF-hand Containing Proteins AT2G15680 40.580 3.00e-11 55.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g02078 - - gmx:102665563 115.931
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g02078 06 13814600 13814890 Bva06g02078 06 13814600 13814890 ECH