Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g02027 atgGCAGGTAATGTGGCTTCTGCTACCGTCTTCACATTAGAAAACCGTTGCAGTTACACAGTATGGCCCGGAACACTTTCCGGCAACGGCGGTGCGGCCATCGGCGACGGCGGGTTTTCCTTGCAACCTGGATCGTCAGTTCAGCTCACTGCTCCAATTGGTTGGTCTGGCCGGTTTTGGGCCCGAACCGGCTGCAACTTCGATAATGCGGGTAATGAAAAATGTGTTACCGGAGATTGTGGCGGGCTAAGATGCGTTGGGGGAGGAGCTCCGCCGGTGACGCTTGCCGAGTTCACCATTGGAAGCGCCAGCAATAACAAGGATTTCTACGACGTGAGCCTTGTGGACGGCTACAATGTGGGGATGGGTGTGAAGGCAACCGGAGGAACCGGTGATTGCCAGTCCGCGGGGTGTGTTGCAGACTTGAATTTGCACTGCCCGAGTGAGTTGCAGGTAATGGACGGGGGTTCAGTGGTGGCTTGCAAGAGTGCATGCGCGGCCTTCAACACGGCTGAGTTCTGCTGCACCGGGGATCACTCAACTCCACAAACTTGTTCGCCAACGCAATATTCGGAGATGTTCAAGAACGCATGTCCCACTGCCTACAGCTACGCATACGACGACGCTTCGAGCACTTGCACATGTTCTGGCTCTGACTACATTATCACATTTTGTCCGACGGTATCCTCATG 692 0.5477 MAGNVASATVFTLENRCSYTVWPGTLSGNGGAAIGDGGFSLQPGSSVQLTAPIGWSGRFWARTGCNFDNAGNEKCVTGDCGGLRCVGGGAPPVTLAEFTIGSASNNKDFYDVSLVDGYNVGMGVKATGGTGDCQSAGCVADLNLHCPSELQVMDGGSVVACKSACAAFNTAEFCCTGDHSTPQTCSPTQYSEMFKNACPTAYSYAYDDASSTCTCSGSDYIITFCPTVSS 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g02027 230 SUPERFAMILY Osmotin, thaumatin-like protein 10 226 IPR037176 -
Bva06g02027 230 SMART tha2 11 226 IPR001938 -
Bva06g02027 230 PANTHER PATHOGENESIS-RELATED PROTEIN 5 5 226 - -
Bva06g02027 230 Pfam Thaumatin family 15 226 IPR001938 -
Bva06g02027 230 ProSiteProfiles Thaumatin family profile. 8 226 IPR001938 -
Bva06g02027 230 PANTHER OS03G0233200 PROTEIN 5 226 IPR001938 -
Bva06g02027 230 PIRSF PR5 1 230 IPR001938 -
Bva06g02027 230 CDD TLP-PA 10 225 - -
Bva06g02027 230 Gene3D Thaumatin 9 226 IPR037176 -
Bva06g02027 230 PRINTS Pathogenesis-related protein signature 108 124 IPR001938 -
Bva06g02027 230 PRINTS Pathogenesis-related protein signature 58 69 IPR001938 -
Bva06g02027 230 PRINTS Pathogenesis-related protein signature 10 22 IPR001938 -
Bva06g02027 230 PRINTS Pathogenesis-related protein signature 70 99 IPR001938 -
Bva06g02027 230 PRINTS Pathogenesis-related protein signature 216 225 IPR001938 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g02027 Bva-Chr6 13554513 13555325 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g02027 11 226 Receptor kinase-like Gene Family AT5G38280 48.000 1.15e-64 210
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g02027 - - jre:109002520 397.897
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g02027 06 13554513 13555325 Bva06g02027 06 13554513 13555325 ECH