Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g02024 ATGCTTGAAGCAATGGAGAGTTCCGTCAATGGTGGCTTCTCCCACTTGCAGAGCTATGGAGATAGTAGCGAAGAGGAGCTGTCTGTGCTTCCTCGTCATACTAAGGTTGTGGTCACTGGAAATAACCGTACCAAATCCGTGCTTGTTGGTCTCCAAGGAGTGGTTAAGAAAGCCGTTGGATTAGGCGGGTGGCATTGGCTGGTTCTTACAAATGGTATTGAAGTGAAGCTGCAGAGGAATGCTCTTAGCGTGATTGAGGCACCCACTGGAAATGAGGAAGATGATGaccttgaatttgaaaatatgcaGTGGAATGGATCAGATATGGcATCGGATGACACCCAAAAGTCCCACAAATCGAGGCACAGAATGCATAGATCTTTGGGATCATCGCAGAAGACTATGAGCAGATCCCTCTCCGGCGATTCACACTCCAAGGGGTCCATTTCTACGCCTTATGGGTCCACGAGGGTTGACTTGAGCAAGCTGGAGATGGCTGCATTGTGGAGATATTGGCGACATTTCAATCTAGTGGATGCTGCCCCAAACCCATCAAAAGAGCAACTAGTGGATGTCGTTCAGAGGCATTTCGTGTCACAGCAAATGGACGAGTTGCAGGTAATTATGGGCTTTGTTCAAGCTGCAAAGAGACTCAAAACTGTCTATAAATG 671 0.4635 MLEAMESSVNGGFSHLQSYGDSSEEELSVLPRHTKVVVTGNNRTKSVLVGLQGVVKKAVGLGGWHWLVLTNGIEVKLQRNALSVIEAPTGNEEDDDLEFENMQWNGSDMASDDTQKSHKSRHRMHRSLGSSQKTMSRSLSGDSHSKGSISTPYGSTRVDLSKLEMAALWRYWRHFNLVDAAPNPSKEQLVDVVQRHFVSQQMDELQVIMGFVQAAKRLKTVYK 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g02024 223 PANTHER SAP30 1 223 IPR024145 -
Bva06g02024 223 Pfam Sin3 binding region of histone deacetylase complex subunit SAP30 163 216 IPR025718 GO:0005515
Bva06g02024 223 MobiDBLite consensus disorder prediction 105 152 - -
Bva06g02024 223 MobiDBLite consensus disorder prediction 129 152 - -
Bva06g02024 223 PANTHER HISTONE DEACETYLASE COMPLEX SUBUNIT SAP30 SIN3-BINDING PROTEIN 1 223 - -
Bva06g02024 223 Gene3D - 138 223 IPR038291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g02024 Bva-Chr6 13533774 13537333 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g02024 - - gmx:100809195 413.69
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g02024 06 13533774 13537333 Bva06g02024 06 13533774 13537333 ECH