Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g02007 ATGCCCTTTTCCTCAGTTCCCGCTCGTCTCACGCTTCTCGCTCTTTTCTCTGCCACCGCCTTCTATTGTCTATACAAAGCTCGTCGCCTTAGACACCTTAAACTATCCCTACACCCTAATTCTAACAGAGGTAAGATCCTATTCATTTCTCAAACAGGGACCTCTAAAGCCCTTGCCAATCGTCTTCACCAACTGTTAGCTGCTAAAGATCTTGCATTCGACATCGTCGACACCAAAGACTACGAGCCTGAAGACCTTCCTAAAGAAACGATTGTCCTCGTTGTGGTATCAACTTGGGAAGATGGAAAGCCACCTCCAACTGCTAAATTCTTCGCAACATGGCTAGCAGAAAGTGCCAAAGACTTTCGAGTCGGTTCTTTATTGCTTTCCAAGTGCAAATTTGCCGTATTTGGTGTCGGCAGCAGAGCTTATGGAGCTACTTTCAATGCCGTGGCAAGGGATTTTTCGAAGCAGATGAGGGCATTGGGTGCCATGGAGATGCTTCCTTTGTGGGAAGGGGATATTGATAGGGGTGATGTAGATGAGGTTTTCGATCTTTGGTGTACAAAGGTCGTCAACTTCTTGAAGGTTCGTATTTTAGAAAATGGCGGGGTTTTAGATTCCAGTGTTTCTGGAGAATGCAATACTCCTAGCGCTGAGGAGTCTGAAGGGGATTCCGAAGGTGAGAGCGATATGGAGTCAGAGATTGTTGATCTTGAGGACATTGCGGGTAAAGGTCCTTCTAGGAAGTCAGTGCCAGCTGAGGAGACTAATGGGAAAGTGAATGGCAAAAGAGAAATGGTGACTCCAGTGATTAGAGCAAATTTAGAAAAGCAGggttataaaattattggttCACACAGTGGTGTTAAGATTTGTAGATGGACCAAGTCACAGCTTCGAGGTCGAGGTGGTTGTTACAAGCATTCATTTTATGGCATAGAAAGTCATAGGTGCATGGAGGCAACCCCTAGTTTGGCATGTGCAAATAAATGTGTGTTCTGCTGGAGGCATCATACAAATCCTGTGGGGAAAAGTTGGCAGTGGAAGATGGATGATCCAATAGAGATTGTAAATACCGCAATAGACCTCCATACAAATATGATTAAACAAATGAAAGGAGTTCCTGGAGTCACCTCGGAGCGATTAACTGAAGGTCTTTCTCCTCAACATTGTGCATTGTCACTTGTTGGAGAACCTATCATGTATCCAGAAATAAATGCACTTGTGGACGAGCTGCACAAACGAAGAATTTCCACTTTTCTTGTAACAAACGCACAGTTTCCTGAGAAGATTAAGTTGTTGAAGCCAGTCACCCAGTTATACGTCAGTGTAGATGCTGCAACAAAAGACACTTTGAAGGCGATTGATAGGCCACTCTTTGGAGATTTCTGGGAGCGATTCATTGAATCCTTGATTGCTCTCAGAGAGAAACAGCAGCGAACTGTTTATCGGCTGACTCTGGTTAAAGGTTGGAATACTGACGATGTAGACGCTTATTTTAAGCTCTTCAGCATAGGAAAACCTGACTTCGTTGAAATCAAGGGAGTGACATATTGTGGCTCGTCTGCTACATCAAAACTGACGATGGAAAATGTCCCCTGGCATGCTGACGTAAAAGCTTTTTCAGAGGCCTTATCTCTGAAAAGTCAAGGGGAGTACGAAGTTGCATGTGAACATGCTCACTCATGTTGTGTCCTCTTGGCTAAAACTGATAAGTTCAAGATTGATGGTCAGTGGTATACCTGGATAGATTATGGGAAGTTTCATGACCTGGTGGCTTCTGGAAGAACTTTTGACAGCAGAGATTACATGGCTGCCACACCATCCTGGGCTGTCTATGGTGCAGAGGAAGGTGGATTTGATCCAGGACAATCGAGATATAGGAAAGAAAGGCATCATAAATCAAAGCGGTG 1916 0.4405 MPFSSVPARLTLLALFSATAFYCLYKARRLRHLKLSLHPNSNRGKILFISQTGTSKALANRLHQLLAAKDLAFDIVDTKDYEPEDLPKETIVLVVVSTWEDGKPPPTAKFFATWLAESAKDFRVGSLLLSKCKFAVFGVGSRAYGATFNAVARDFSKQMRALGAMEMLPLWEGDIDRGDVDEVFDLWCTKVVNFLKVRILENGGVLDSSVSGECNTPSAEESEGDSEGESDMESEIVDLEDIAGKGPSRKSVPAEETNGKVNGKREMVTPVIRANLEKQGYKIIGSHSGVKICRWTKSQLRGRGGCYKHSFYGIESHRCMEATPSLACANKCVFCWRHHTNPVGKSWQWKMDDPIEIVNTAIDLHTNMIKQMKGVPGVTSERLTEGLSPQHCALSLVGEPIMYPEINALVDELHKRRISTFLVTNAQFPEKIKLLKPVTQLYVSVDAATKDTLKAIDRPLFGDFWERFIESLIALREKQQRTVYRLTLVKGWNTDDVDAYFKLFSIGKPDFVEIKGVTYCGSSATSKLTMENVPWHADVKAFSEALSLKSQGEYEVACEHAHSCCVLLAKTDKFKIDGQWYTWIDYGKFHDLVASGRTFDSRDYMAATPSWAVYGAEEGGFDPGQSRYRKERHHKSKR 638
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g02007 638 Gene3D Aldolase class I 252 582 IPR013785 -
Bva06g02007 638 SFLD tRNA wybutosine-synthesizing 263 574 IPR034556 GO:0008033|GO:0051539
Bva06g02007 638 Pfam Flavodoxin 46 187 IPR008254 GO:0010181
Bva06g02007 638 SUPERFAMILY Flavoproteins 45 196 IPR029039 -
Bva06g02007 638 MobiDBLite consensus disorder prediction 208 233 - -
Bva06g02007 638 CDD Radical_SAM 324 524 - -
Bva06g02007 638 SFLD Radical SAM 263 574 IPR007197 GO:0003824|GO:0051536
Bva06g02007 638 PANTHER S-ADENOSYL-L-METHIONINE-DEPENDENT TRNA 4-DEMETHYLWYOSINE SYNTHASE 3 635 - -
Bva06g02007 638 SUPERFAMILY Radical SAM enzymes 325 505 - -
Bva06g02007 638 PRINTS Flavodoxin signature 93 104 IPR001094 GO:0010181
Bva06g02007 638 PRINTS Flavodoxin signature 156 175 IPR001094 GO:0010181
Bva06g02007 638 PRINTS Flavodoxin signature 45 58 IPR001094 GO:0010181
Bva06g02007 638 PRINTS Flavodoxin signature 131 141 IPR001094 GO:0010181
Bva06g02007 638 MobiDBLite consensus disorder prediction 617 638 - -
Bva06g02007 638 Pfam Radical SAM superfamily 324 503 IPR007197 GO:0003824|GO:0051536
Bva06g02007 638 Pfam Wyosine base formation 507 570 IPR013917 -
Bva06g02007 638 ProSiteProfiles Flavodoxin-like domain profile. 44 192 IPR008254 GO:0010181
Bva06g02007 638 PANTHER S-ADENOSYL-L-METHIONINE-DEPENDENT TRNA 4-DEMETHYLWYOSINE SYNTHASE 3 635 IPR034556 GO:0008033|GO:0051539
Bva06g02007 638 ProSiteProfiles Radical SAM core domain profile. 312 555 IPR007197 GO:0003824|GO:0051536
Bva06g02007 638 Gene3D - 26 202 IPR029039 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g02007 K15449 - jre:108991714 1053.51
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g02007 06 13444668 13448754 Bva06g02007 06 13444668 13448754 ECH