Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g02006 ATGGCGGCAGAAATAAAGTGCTGCGGACCCAAGTTCTCGTTGTACATACTGGTGATAGCAGGATTGGTGTTATTTGCCGGGCTAATGGCTGGACTCACTCTGGGTCTCATGTCTTTGGGGCTCGTCGACCTTGAGGTTCTTATGAAGTCCGGCCGTCCTCAGGATCGCATCTATGCTGCTAAAATATTTCCGGTGGTTAAGAACCAACATCTTTTACTTTGTACGCTTTTGATTGGCAACTCTTTAGCAATGGAGGCTCTTCCCATTTTCCTGGATGCGATTGTCCCTCCATGGACAGCAATCTTGTTATCAGTTACTCTTATTCTCATGTTTGGAgagATACTGCCACAATCAGTCTGTACTCGTTATGGCTTGACTGTTGGAGCAACAATGGCACCATTTGTTCGTGTTCTTCTTCTGATATTCTTCCCCATCGCCTATCCCATTAGCAAGGTTCTTGACTGGATGCTAGGTAAGGGGCATACTGCCCTTTTGAAGAGAGCAGAGCTTAAGACTTTTGTAAATTTCCATGGGAATGAgGCTGGAAAAGGCGGAGATTTAACACATGATGAGACCACTATCATAACTGGTGCACTAGAATTGACAGAAAAGACGGCAAAAGATGCCATGACTCCCATGTCAAAGGCATTTTCCCTTGATCTGCATTCAACTctaaatttGGAGACACTAAACGCAATAATGACAATGGGCCATAGTAGAGTTCCAGTTTACGCAGGAGAGCCCACAAATATTATTGGACTTGttctggttaaaaatcttttaatggttgatcgaaaagaagaagttcCTCTAAGAAAAATGATCATTAGAAAAATTCCTCgAGTTTCAGAGAAAATGCCTTTATATGATATACTAAATGAATTTCAGAAGGGTCACAGTCATATTGCTGTTGTCTATGAGGATCTGAATGATAAAAAGGAAGTGCCAAATAAAGTCAAAGATGGAGAACAACTTGGGTTTAAGGATAGCTGTAAGAACAAGGGAGAGAAGGCATCATTGGATGGAGGTATAAATACAAAGGATGGTGCCAAATTGGAGTCGCACGATACTTTGACAACTGCTGCTAAGATTGGTGGGGGtccagagaaaaagaaaagtccaGCAGTTACTCCTGCCTACAAGAAGCGACATAGAGGTTGTTCATATTGCATCCTAGACATTGAAAATGCTCCCCTGCCATCATTTCCACTCAATGAAGTGGTTGTTGGGGTTATTACAATGGAGGATGTCATTGAAGAACTTCTTCAGGAGGAGATATTAGATGAAACTGATGAATACGTCAATATCCATAACAAGATAAAAGTAAACATGCATGCTGCTAAAGGGAAGGCTTCCGATCTGAATCTACATCGTCCTACGGTGTCATCACCTGCTCCTTTAGCAATTCCA 1410 0.4021 MAAEIKCCGPKFSLYILVIAGLVLFAGLMAGLTLGLMSLGLVDLEVLMKSGRPQDRIYAAKIFPVVKNQHLLLCTLLIGNSLAMEALPIFLDAIVPPWTAILLSVTLILMFGEILPQSVCTRYGLTVGATMAPFVRVLLLIFFPIAYPISKVLDWMLGKGHTALLKRAELKTFVNFHGNEAGKGGDLTHDETTIITGALELTEKTAKDAMTPMSKAFSLDLHSTLNLETLNAIMTMGHSRVPVYAGEPTNIIGLVLVKNLLMVDRKEEVPLRKMIIRKIPRVSEKMPLYDILNEFQKGHSHIAVVYEDLNDKKEVPNKVKDGEQLGFKDSCKNKGEKASLDGGINTKDGAKLESHDTLTTAAKIGGGPEKKKSPAVTPAYKKRHRGCSYCILDIENAPLPSFPLNEVVVGVITMEDVIEELLQEEILDETDEYVNIHNKIKVNMHAAKGKASDLNLHRPTVSSPAPLAI 469
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g02006 469 Pfam Cyclin M transmembrane N-terminal domain 18 189 IPR002550 -
Bva06g02006 469 PANTHER DOMAIN-CONTAINING PROTEIN, PUTATIVE, EXPRESSED-RELATED 2 449 - -
Bva06g02006 469 ProSiteProfiles CNNM transmembrane domain profile. 8 191 IPR002550 -
Bva06g02006 469 PANTHER ANCIENT CONSERVED DOMAIN PROTEIN-RELATED 2 449 IPR045095 GO:0010960
Bva06g02006 469 Gene3D - 393 429 IPR046342 -
Bva06g02006 469 SUPERFAMILY CBS-domain pair 195 423 IPR046342 -
Bva06g02006 469 CDD CBS_pair_CorC_HlyC_assoc 205 306 IPR044751 -
Bva06g02006 469 Gene3D - 189 326 IPR046342 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g02006 Bva-Chr6 13439586 13444070 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g02006 K16302 - gmx:100804572 706.057
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g02006 06 13439586 13444070 Bva06g02006 06 13439586 13444070 ECH