Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g02001 ATGGACCTAGGCGGCGCGACCACCGTCGCCACCCCTGGCGGTGGCGCCGTGGGAGTTCAGATCCAACACTCTCGCAGGGTCCTCCCAGATTTTCTTCAGAGCGTCAACCTCAAATTTACGGCAATTGTGGCTTCACCTTCAGTACAATCTTCTCCTTATCACCGATTCATGGAGCACTCCCGGCTCACCGGTGACTTCGACGATTCATCCCTTGAATTTCAGCGCAAAATTTTGGAGCGCTCCGGACTCGGCGAGGACACTTACGTTCCTGAGGCGATGCATTCTATCCCTCCGAGGCCGAGCATGGCGGCAGCCAGGGAGGAGGCTGAGCAGGTCATGTATGGTGCATTGGATAATCTTTTCCTTAATACCAATATTAAGCCTAAGGATATTGGCATTCTTATTGTGAATTGTAGTTTGTTTAACCCAACACCCTCACTTTCAGCCATGATcgttaacaaatataaattgagaGGTAATATTAGGAGCTTTAATTTGGGTGGAATGGGATGCAGTGCTGGGGTTATAGCTCTTGATCTTGCCAAGGATTTATTGCAAATTCACAGGAATACTTATGCTGTTATTGTCAGTACAGAAAACATCACACAGAATTGGTATTTTGGCAATAAGAAATCTATGCTGATACCCAATTGCTTGTTTCGAGTTGGGGGTGCTGCAGTCCTACTTTCCAATAAGTCTGCAGATAGGAGGAGGGCAAAGTATAGGCTTCTTCATGTTGTAAGGACTCATCGTGGGGCTGATGATAAGGCTTTTCGATGCGTTTATCAAGAACAGGATGATGCTGGCAAGACTGGTGTTTCCTTATCTAAAGATTTAATGGCAATAGCTGGAGGGGCACTTAAAACCAACATCACAACTCTTGGTCCTCTTGTGCTCCCCATTAGTGAGCAGCTTCTGTTCTTTGCTACTTTGGTGATGAAGAAATTGTTCAGGGCAGACGTTAAGCCTTACATACCGGATTTTAAACTGGCATTTAACCATTTCTGTATACATGCTGGGGGGAGGGCAGTGATTGATGAGCTGGAGAAGAACCTACAGCTGCTTCCAGTGCATGTAGAGGCTTCTCGTATGACTCTTCACCGTTTTGGGAATACTTCATCAAGCTCCATTTGGTATGAATTATCGTATACTGAAGCAAAAGGGAGAATCCGAAAGAGCGATCGGATCTGGCAAATTGCATTTGGAAGTGGTTTTAAATGTAATAGTGCAGTCTGGGAGGCACTACAGAATGTGAGGCCATCTCCTAATGAACCCTGGGAAGATTGCATTGACAAGTATCCAGTTAAAACAGTAAGCTA 1319 0.4511 MDLGGATTVATPGGGAVGVQIQHSRRVLPDFLQSVNLKFTAIVASPSVQSSPYHRFMEHSRLTGDFDDSSLEFQRKILERSGLGEDTYVPEAMHSIPPRPSMAAAREEAEQVMYGALDNLFLNTNIKPKDIGILIVNCSLFNPTPSLSAMIVNKYKLRGNIRSFNLGGMGCSAGVIALDLAKDLLQIHRNTYAVIVSTENITQNWYFGNKKSMLIPNCLFRVGGAAVLLSNKSADRRRAKYRLLHVVRTHRGADDKAFRCVYQEQDDAGKTGVSLSKDLMAIAGGALKTNITTLGPLVLPISEQLLFFATLVMKKLFRADVKPYIPDFKLAFNHFCIHAGGRAVIDELEKNLQLLPVHVEASRMTLHRFGNTSSSSIWYELSYTEAKGRIRKSDRIWQIAFGSGFKCNSAVWEALQNVRPSPNEPWEDCIDKYPVKTVS 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g02001 439 Gene3D - 35 414 IPR016039 GO:0016746
Bva06g02001 439 Pfam FAE1/Type III polyketide synthase-like protein 49 316 IPR013601 GO:0006633|GO:0016020|GO:0016747
Bva06g02001 439 PIRSF Very_long_ch_3-ktacl-CoA_syn 37 439 IPR012392 GO:0006633|GO:0016020|GO:0016747
Bva06g02001 439 SUPERFAMILY Thiolase-like 51 239 IPR016039 GO:0016746
Bva06g02001 439 Pfam 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 333 413 IPR013747 -
Bva06g02001 439 PANTHER 3-KETOACYL-COA SYNTHASE 4 45 438 - -
Bva06g02001 439 CDD CHS_like 73 412 - -
Bva06g02001 439 PANTHER 3-KETOACYL-COA SYNTHASE 45 438 IPR012392 GO:0006633|GO:0016020|GO:0016747
Bva06g02001 439 SUPERFAMILY Thiolase-like 244 413 IPR016039 GO:0016746
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g02001 Bva-Chr6 13424733 13426808 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g02001 46 435 Miscellaneous Gene Families AT1G19440 87.179 0.0 732
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g02001 K15397 - mnt:21384146 727.628
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g02001 06 13424733 13426808 Bva06g02001 06 13424733 13426808 ECH