Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g01989 ATGTTCAGAAACCAGTACGACACCGACGTTACTACATGGAGCCCCGCCGGGAGGCTCTTCCAGGTGGAATACGCGATGGAGGCAGTCAAACAAGGTTCCGCTGCCATAGGCCTCCGGTCTAAGACCCACGTTGTCCTGGCTTGCGTCAATAAGGCTAACTCGGAGCTCTCGTCTCACCAGAAGAAGATCTTCAAGGTCGATGATCACATCGGAGTTGCCATTGCTGGACTCACCGCCGATGGTCGAGTTCTCTCCCGTTATATGCGATCCGAGTGCATTAACTACAGCTATACGTACGAGTCGCCACTTCCCGTTGGACGACTCGTCGTTCAACTCGCAGACAAAGCCCAGGTTTGCACCCAACGGTCATGGAAACGCCCTTATGGCGTCGGTCTCCTGGTAGCTGGATTGGATGAATCTGGAGCTCACCTTTACTACAACTGCCCTAGCGGGAACTACTTTGAATATCAGGCTTTTGCAATTGGGTCTCGCTCACAAGCTGCAAAGACATACTTGGAACGCAGGTTTGAGAACTTCTCGGGTTCCTCAAGGGAAGACCTTATCAAGGATGCACTTATTGCAACCAGAGAAACCCTGCAAGGGGAAAAACTAAGGAGTTCCATATGTACGATTGCTGTAGTTGGAGTCGGTGAGCCATTCCACATATTGGATCAGGAAACAGTACAAAAGTTGATTAATACCTTCGAGATTGTGAGGGAGGAAGAAGGTCCTGCTGCTGAAACTCAGCCAGCAGCTGAGACGGGTGCTGCTACAGATCAGGATTCTGCAGACCAGGGTGCTGCTGCTCCAGACCAAGATGTTGCTCCAATGGACATTTG 839 0.5113 MFRNQYDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLACVNKANSELSSHQKKIFKVDDHIGVAIAGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCTQRSWKRPYGVGLLVAGLDESGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFSGSSREDLIKDALIATRETLQGEKLRSSICTIAVVGVGEPFHILDQETVQKLINTFEIVREEEGPAAETQPAAETGAATDQDSADQGAAAPDQDVAPMDI 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g01989 279 Pfam Proteasome subunit A N-terminal signature 6 28 IPR000426 GO:0006511|GO:0019773
Bva06g01989 279 ProSiteProfiles Proteasome alpha-type subunit profile. 21 232 IPR023332 -
Bva06g01989 279 PANTHER PROTEASOME SUBUNIT ALPHA TYPE 1 264 - -
Bva06g01989 279 MobiDBLite consensus disorder prediction 240 279 - -
Bva06g01989 279 PANTHER PROTEASOME SUBUNIT ALPHA/BETA 1 264 - -
Bva06g01989 279 Pfam Proteasome subunit 29 214 IPR001353 GO:0005839|GO:0051603
Bva06g01989 279 Gene3D Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 2 232 IPR029055 -
Bva06g01989 279 SUPERFAMILY N-terminal nucleophile aminohydrolases (Ntn hydrolases) 4 235 IPR029055 -
Bva06g01989 279 SMART Proteasome_A_N_2 6 28 IPR000426 GO:0006511|GO:0019773
Bva06g01989 279 ProSitePatterns Proteasome alpha-type subunits signature. 6 28 IPR000426 GO:0006511|GO:0019773
Bva06g01989 279 CDD proteasome_alpha_type_1 6 215 IPR035144 GO:0019773
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g01989 Bva-Chr6 13367796 13370473 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g01989 K02725 - gmx:100797380 498.434
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g01989 06 13367796 13370473 Bva06g01989 06 13367796 13370473 ECH