Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g01980 ATGCTTAGCTTCCGtaccatttcttcttttgttatttataACGCTCCCGGTTCCCAAAAAGCCCAGAGACAGATGGAAGTTGTTCAAGTACTTCACATGAACAAAGGTGCAGGAGTCACAAGTTATGCCATGAACTCCGCTGTTCAGAGCAAGATTATCTCAGTAACAAAGCCAGCAATTGAGAGAGCTATAAAAGAAACTCTGTGCTCGATAAGCTGGCCAGTAAGTATGGGCATTGCTGACTTGGGTTGTTCTTCTGGACCCAACGCCCTTTTGGTCGTTACAGAGATACTGGATGCTGTGTTTGATACTTGCTGCCACCTTGAGCGATCATCACCGGAGTTTAAGGTCTATCTCAATGACCTTTTCTCCAATGACTTCAATAACATCTTCACCTCGTTGCCAGCTTTCTACAGAAAACAAAgccaagaaaaggaaagtggGTTTGGACCCTGTTTCATTTTGGGTGCCCCTGGCTCATTTTACGGAAGACTGTTTCCCAGTAACAGCCTTCACTTTGTGCACTCCTCTTCCAGCCTCCATTGGCTTTCTCAGGTTCCTATTGGAGTGGAAGGGAGATCATTGAACAAGGGAAAGATCTACATATCCAAGAGTAGTCCGCAATGCGTGCTGGATGCATACTTGTCGCAATTCCAGAATGACTTTTCCTTCTTCCTAAAGTCGCGTTCCCAGGAGATGGTGACAGGGGCACGCATGGTCTTGTCCTTTATGGCCAGAAAAGACGTGGATCCCACGACCCCAGAGAGTTGCTACCAGTGGGAACTGTTAGCTCACGCCCTTATGACCATGGTTGCACAGggggtaattgaagaagaaaaggtgGATTTGTTTGACGCTCCTTACTATGCTCCATGCATACAAGAGTTGAAGTTGGAGATAGAAAAGGAAGGGTCGTTTGTGATGGACTGGTCAGATGGCTATGAAATCGATTGGGATGATGGAGCGGATCAGATGGTGACCGATGAGTCATTGGCCCCGCTATCGAGTGAAGAGCGAGTGGCCAGGACCATTAGGGCTGTGGTTGAGTCTATGCTGGAATCACACTTTGGAGGTCATATAATGGATGAGTTATTTCGCAGATATGCCAAACTTGTGGGGGATCATTTATCGAACACTAGGACCAGATACTACAATCTGGTCATTTCCCTCGTCAAGAAGGCCTA 1184 0.4451 MLSFRTISSFVIYNAPGSQKAQRQMEVVQVLHMNKGAGVTSYAMNSAVQSKIISVTKPAIERAIKETLCSISWPVSMGIADLGCSSGPNALLVVTEILDAVFDTCCHLERSSPEFKVYLNDLFSNDFNNIFTSLPAFYRKQSQEKESGFGPCFILGAPGSFYGRLFPSNSLHFVHSSSSLHWLSQVPIGVEGRSLNKGKIYISKSSPQCVLDAYLSQFQNDFSFFLKSRSQEMVTGARMVLSFMARKDVDPTTPESCYQWELLAHALMTMVAQGVIEEEKVDLFDAPYYAPCIQELKLEIEKEGSFVMDWSDGYEIDWDDGADQMVTDESLAPLSSEERVARTIRAVVESMLESHFGGHIMDELFRRYAKLVGDHLSNTRTRYYNLVISLVKKA 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g01980 394 PANTHER JASMONATE O-METHYLTRANSFERASE-LIKE 28 391 - -
Bva06g01980 394 Pfam SAM dependent carboxyl methyltransferase 63 392 IPR005299 GO:0008168
Bva06g01980 394 PANTHER S-ADENOSYL-L-METHIONINE:CARBOXYL METHYLTRANSFERASE FAMILY PROTEIN 28 391 IPR005299 GO:0008168
Bva06g01980 394 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 25 393 IPR029063 -
Bva06g01980 394 Gene3D - 30 379 IPR042086 -
Bva06g01980 394 Gene3D Vaccinia Virus protein VP39 45 317 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g01980 Bva-Chr6 13331382 13334344 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g01980 K08241 - gmx:100776956 516.924
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g01980 06 13331382 13334344 Bva06g01980 06 13331382 13334344 ECH