Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g01972 ATGGGATCAGCTTGTTGTGTTGCTGCAAAGGACCGTACTATCCCCAGCAGAACTGGAGATGAAAGTTTGCATAGGAATGTTGCATGTTCACCATCATGGAGCTTTCGATGGGATAGTCGGGGGCGTGTAGCTGGTGAAATTGAGAACCCTTCTTGTCACACATCTCATAGAATCAGCAGAAATGTTAGCATGGAGTTAAAAGGATCATTAAATTCTGAAAGAGGTAATTTATCTGATGGGGGAAGCACCCTAGAGACATCAGTGACTCCTATTTCTCAGAAGTCCCCTGTTCATGAGGCTTTGGTTGCAAATCCAATGACTCCATCCTCAGATCTGTCCATAACAAGCAATTATTCTACAGTGgtGAAGAATCTATCAGAGATTGCAGAGTCTTCTGTtccaaatctttcattttcGATACCTTCGGTTTTCTCAACGCCTACAAAAGATGCTTTGCCCAGTCATAATTATCATCATCTTCCCAACTCAGCGCCATCAAGATGGGCTCATCGTTCTCCTGGACACCCACTGTTGAGACAGATTTCGGACAGTCGGATCCTGGGATTGAAATCACCGGACAACTCTATTTCTGAGGGAAGGCCATCATTTGTGCTGTCCACTTGCAGTAATGACATAGCGAATGGATCACAAGGCGGATCATCTGATGGCTGGTCCATGCGCACTTTCTCTGAGCTTGTGGCCTCGTCACAAAGAGAAAGGTGGTCTTTTGACAGTGAATACTTAGGTTCAGGTCGTCACAAGATAAGTGGATCCAGTAGCAGATTTTCATATTCACCTTCCATGGATCCACAATCTTGCGGGGCTTGTTCCAAGCCTTTGACTGAAAGATCTTATTGGGGCAaccataataaatttatggcCAGCAACGACGTTGCAGTGGTTGCTGTCCTTGTTTGTGGACATGCGTATCATGCCGAGTGCTTAGAGACTATGACGCCAGAGGCAGATAGATATGATCCAGCTTGTCCAATTTGCATGGTTGGAGAAAAGCAGGTGTCGAACTTGTCAAGAAAAGGTTTTCGCGCCGAATCAGATATAAAGGCAAAAAACCACAAGATATCCAAAAATCGAGTAGTTGATAGTTATTTTGATGGTGGTTTTGATGTTTTTGATCGCCAAAAAGATGTTGAACGGAGAGGTATAGTTCCGAAGATGGAGGCTAGTTCTAGTCGCAGGAGCTCATTTGGAAAGCCATTCTTAAGACGACATTTTTCACTTGGCTCCAAGTGGGGCCGATCTTTGTCAGAGAATGATTCTGCCAGGAAGAAGGGCTTTTGGGCAAGATATCGGAAAGATTG 1319 0.4359 MGSACCVAAKDRTIPSRTGDESLHRNVACSPSWSFRWDSRGRVAGEIENPSCHTSHRISRNVSMELKGSLNSERGNLSDGGSTLETSVTPISQKSPVHEALVANPMTPSSDLSITSNYSTVVKNLSEIAESSVPNLSFSIPSVFSTPTKDALPSHNYHHLPNSAPSRWAHRSPGHPLLRQISDSRILGLKSPDNSISEGRPSFVLSTCSNDIANGSQGGSSDGWSMRTFSELVASSQRERWSFDSEYLGSGRHKISGSSSRFSYSPSMDPQSCGACSKPLTERSYWGNHNKFMASNDVAVVAVLVCGHAYHAECLETMTPEADRYDPACPICMVGEKQVSNLSRKGFRAESDIKAKNHKISKNRVVDSYFDGGFDVFDRQKDVERRGIVPKMEASSSRRSSFGKPFLRRHFSLGSKWGRSLSENDSARKKGFWARYRKD 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g01972 439 MobiDBLite consensus disorder prediction 70 96 - -
Bva06g01972 439 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 259 334 IPR013083 -
Bva06g01972 439 MobiDBLite consensus disorder prediction 422 439 - -
Bva06g01972 439 ProSiteProfiles Zinc finger RING-type profile. 273 332 IPR001841 -
Bva06g01972 439 SUPERFAMILY RING/U-box 268 334 - -
Bva06g01972 439 MobiDBLite consensus disorder prediction 70 94 - -
Bva06g01972 439 PANTHER C3HC4-TYPE RING ZINC FINGER PROTEIN 1 433 - -
Bva06g01972 439 PANTHER EXPRESSED PROTEIN 1 433 - -
Bva06g01972 439 SMART ring_2 273 332 IPR001841 -
Bva06g01972 439 MobiDBLite consensus disorder prediction 417 439 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g01972 Bva-Chr6 13284344 13289109 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g01972 - - gmx:100800918 724.546
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g01972 06 13284344 13289109 Bva06g01972 06 13284344 13289109 ECH