Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g01965 ATGAGTTTTGAGGATTCTGGAAAGAAACCAGTATCAGTTGGGCCATGGGGAGGCAATGAGGGATCCCCTTGGGATGATGGGATATATTCAACTATTAAGCAATTGGTGATAGCTCATGGGGCCGGTATTGACTCCATCCAGATTGAATACGTTAAGAAAGGTTGTTCAATCTGGTCTGACAAGCATGGTGGTACCGGAGGCCATAAAACTGATAAGGTTAATCTTGACTACCCAGATGAGTTCCTAACTTCAATTCATGGATACTATGGTAGCTTAAATGAATGTGCTGCAGTTGTTCGATCACTGAGTTTtcaaagcaacaaaaaaaattatggaccATTTGGTGTTGAGCAGGGGACTTATTTTTCATTCCCAATGACAGGAGGCAAGATTGTTGGGTTCCATGGCAGGTGTGGTTGGTACTTAGATGCAATTGGTGTCTATCTGAAGCCTTTACAGCAATCAAAACCAGAAAAGGCTTTGGTTCATTCACAAGGCTACCTTACTAACACCACTGAGAATGTTGGTTATTCTGTGATACAAGGAAGTGTAGGCCAAAACTACGATATAGTTCTTGCTGTAAGACAGAAAGACGATTTGAGTAAACCTATGATAAATAATGCCTCGAGGAATCTTTCTAGGAGGAAAGAATTTAACTACCCCCGACAGAAAGAACAGGTGGGAAAGACATCTTCAAACTCAAAGGTTGAAGGTGAGGTAACATATGGACCTTGGGGTGGTAATGGTGGATCCATATTCGACGATGGAGTCTACACGGGAATTAGGCAAATCAATCTGTCACGAAATGTTGGAATTGTGTGTATTAGAGTTTTGTATGATCAGGGTGGAGAGCCCATATGGGGAAGCAAACAAGGTGGAACCGGGGGATATAAAAACGAAAAGATCATCTTTGATTTTCCTTCTGAAGTGCTGACACATATAACAGGCTACCATGGACCTCTGATGTACATGGGACCATCTATTATAAAGTCACTGACTTTCTACACCACCAAAAGGATGTATGGACCATATGGGGATGAACAAGGGACCCATTTCACAACTAGGTTAAAAGAAGGGAAAGTTGTTGGCATCCATGGCAGAAAAGGCTTGTTTCTAGATGCCCTTGGTGTACATGTTGTAGAAGGCAAAGTTGTAACACCAGTGACCACACCTTCTCCTAAATCCAATGCAACTATCCGCAGAGAGCCAAGTATTGCTGAAATAGACAGTCCTCAGTGGCCTGCCAAACTGGTACTTACAAAACCGGCGGCACCAATTGAAGagGTTTCTTGTGGTGTGATTAAAGAACCAGCTCCATGCGGACCAGGCCCATGGGGTGGGAATGAAGGTAGACCTTGGGATGATGGAGTGTTCTCAGGAATTAGGCATATTTATCTGACAAGAACATCAGAAGCCATTTGCTCAATTCAAATTGAGTATGACCGAAATGGACAATCTGTATGGTCTGTCAAGCACGGTGGCAATGGAGGAGACACTCTGCACCGGATGAAATTGGAGTACCCACATGAGGTACTTAACTGCATATCTGGCTATTATGGATCAATTAGTAAAGATGATCGGCTTGTAGTCATAAAGTCACTGACCTTCTATACAAGTCGAGGAAAGTACGGTCCATTTGGTGAGGAGGTAGGAAAATTTTTCACTTCAACTACAACAGAGGGCAAAATAGTGGGTTTCCATGGCAGGTGTAGCTTCTACTTGGATGCCATTGGGGTCCATATGCAACATTGGCTTGGAAATCACAAAACTTCAAAGTCCTCTTTCTTCAAGTTTTTCTG 1799 0.4236 MSFEDSGKKPVSVGPWGGNEGSPWDDGIYSTIKQLVIAHGAGIDSIQIEYVKKGCSIWSDKHGGTGGHKTDKVNLDYPDEFLTSIHGYYGSLNECAAVVRSLSFQSNKKNYGPFGVEQGTYFSFPMTGGKIVGFHGRCGWYLDAIGVYLKPLQQSKPEKALVHSQGYLTNTTENVGYSVIQGSVGQNYDIVLAVRQKDDLSKPMINNASRNLSRRKEFNYPRQKEQVGKTSSNSKVEGEVTYGPWGGNGGSIFDDGVYTGIRQINLSRNVGIVCIRVLYDQGGEPIWGSKQGGTGGYKNEKIIFDFPSEVLTHITGYHGPLMYMGPSIIKSLTFYTTKRMYGPYGDEQGTHFTTRLKEGKVVGIHGRKGLFLDALGVHVVEGKVVTPVTTPSPKSNATIRREPSIAEIDSPQWPAKLVLTKPAAPIEEVSCGVIKEPAPCGPGPWGGNEGRPWDDGVFSGIRHIYLTRTSEAICSIQIEYDRNGQSVWSVKHGGNGGDTLHRMKLEYPHEVLNCISGYYGSISKDDRLVVIKSLTFYTSRGKYGPFGEEVGKFFTSTTTEGKIVGFHGRCSFYLDAIGVHMQHWLGNHKTSKSSFFKFF 599
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g01965 599 CDD Jacalin 21 150 IPR033734 GO:0030246
Bva06g01965 599 SUPERFAMILY Mannose-binding lectins 10 151 IPR036404 -
Bva06g01965 599 ProSiteProfiles Jacalin-type lectin domain profile. 439 583 IPR001229 -
Bva06g01965 599 CDD Jacalin 250 379 IPR033734 GO:0030246
Bva06g01965 599 PANTHER JACALIN-RELATED LECTIN 3 7 36 - -
Bva06g01965 599 SMART Jacalin_2 450 583 IPR001229 -
Bva06g01965 599 SMART Jacalin_2 250 381 IPR001229 -
Bva06g01965 599 SMART Jacalin_2 21 151 IPR001229 -
Bva06g01965 599 ProSiteProfiles Jacalin-type lectin domain profile. 10 151 IPR001229 -
Bva06g01965 599 SUPERFAMILY Mannose-binding lectins 439 581 IPR036404 -
Bva06g01965 599 CDD Jacalin 450 582 IPR033734 GO:0030246
Bva06g01965 599 MobiDBLite consensus disorder prediction 224 238 - -
Bva06g01965 599 Gene3D - 226 380 IPR036404 -
Bva06g01965 599 Gene3D - 2 149 IPR036404 -
Bva06g01965 599 Gene3D - 435 582 IPR036404 -
Bva06g01965 599 PANTHER BNAA06G13880D PROTEIN 528 583 - -
Bva06g01965 599 Pfam Jacalin-like lectin domain 21 151 IPR001229 -
Bva06g01965 599 Pfam Jacalin-like lectin domain 450 582 IPR001229 -
Bva06g01965 599 Pfam Jacalin-like lectin domain 250 380 IPR001229 -
Bva06g01965 599 SUPERFAMILY Mannose-binding lectins 241 379 IPR036404 -
Bva06g01965 599 PANTHER JACALIN-RELATED LECTIN 3 31 528 - -
Bva06g01965 599 MobiDBLite consensus disorder prediction 221 240 - -
Bva06g01965 599 ProSiteProfiles Jacalin-type lectin domain profile. 239 381 IPR001229 -
Bva06g01965 599 PANTHER JACALIN-RELATED LECTIN 3 528 583 - -
Bva06g01965 599 PANTHER BNAA06G13880D PROTEIN 7 36 - -
Bva06g01965 599 PANTHER BNAA06G13880D PROTEIN 31 528 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g01965 Bva-Chr6 13258265 13260961 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g01965 246 581 EF-hand Containing Proteins AT1G33790 24.419 1.56e-18 86.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g01965 - - gmx:100804991 897.501
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g01965 06 13258265 13260961 Bva06g01965 06 13258265 13260961 ECH