Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g01959 ATGGCTTCTCTGGTTTGTCCAACATCGCTCCTTCATCCTCGTGAAACTTCCCGTTCTGTCCTTCCAAGAAGGAGTAGTCAGCAAAGACGCGGTTCTGAATGTTATAGATGGTGCACGATTAGGTGCAGACTTGTTGCTGCCAATGTGTCGTCTCCTTCCTCGGTCTCTACTAGGGTGACAAAGGAACCTCACAAGTACTTTGATCATGTGGTCATCACAGTTCGTTCAGGAGATGGAGGCCATGGGGCAATACTTAGTATGCCGAACCGAAGTGTTAATAAGTCAGAAGGAAaacaggaaaaggaaaagtcaAGGAAGAAAAACTCCTATAAAAGGGACTTTGATGGATCACTTATACTTCCTATGGGTGGGCATGGTGGGGATGTCGTGATTTATGCCGATGAGGGTGAAGATTCTTTATTGGAATTTCACAAGCAAAGCCGCTATAATGCAAAGCGCGGTGGCAATGTTAATGCCATGGGTGTTTTGACCTCACAATTGCACAATGGAATCGCTGCTCCAACTTTGCGCATTCCTGTGCCTGTAGGTACAGTTGTAAAACGCAATCGAGGGAAGTTGCTGGCTGACCTAGCACAACCAGGTGATGAAATCCTTGTTGCGCGGGGTGGACAAGGAGGGATTAGTTTATTAGACATGCCGCagcataaaaggaaaaagatgatGTCTTTGACAACAAATGTGATTAGAGATGAGACCGATAAGGTTTTAAGTTTCGGTCAACCTGGGGAGGAAGTTAATTTGGAGCTGATCCTACGAGTTGTTGCTGATGTTGGTCTAGTTGGACTTCCAAATGCTGGGAAATCAACACTGCTGTCAGCCATTACACTTGCTAAACCCGATATTGCTGATTATCCTTTTACAACACTAATACCAAACCTTGGACGCCTTGGTGGTGACCCCAGTTTGGGGGCAGGGATGTATTCATCTGAAGTTACATTGGCAGATTTGCCTGGTCTAATAGAAGGTGCTCACTTAGGGAAGGGTCTAGGTCGGAATTTCTTGAGGCACCTCAGGAGGACACGGCTATTGGTCCATGTTGTTGACGCTGCCACAGAGGATCCTATAAACGATTATAGAACTGTTAGAGAAGAGTTGCGAATGTATAATCCCGAGTACCTTGAACGACCATACATTGTGGTGTTGAATAAGATTGACATTCCTGAGGTGACAGAACAGCTTCCATCATTGGCTGAAGAAATACTGAAATCATTGTCCAATGAAGATGACAAAAACGAGAGAAAAATCGAGGATTATCCACGACCCCTTTCTGTTGTCGGAGTTAGTGTTCTAAAGCGCATCAGAGTTAATGAGATGCTAAAGGAGATAAGGGCAGCTTTAAAAAAGTGCAGGAATCCAAACGAAGAGTTGGGTTTGGGTGTGCCGCCATG 1409 0.4407 MASLVCPTSLLHPRETSRSVLPRRSSQQRRGSECYRWCTIRCRLVAANVSSPSSVSTRVTKEPHKYFDHVVITVRSGDGGHGAILSMPNRSVNKSEGKQEKEKSRKKNSYKRDFDGSLILPMGGHGGDVVIYADEGEDSLLEFHKQSRYNAKRGGNVNAMGVLTSQLHNGIAAPTLRIPVPVGTVVKRNRGKLLADLAQPGDEILVARGGQGGISLLDMPQHKRKKMMSLTTNVIRDETDKVLSFGQPGEEVNLELILRVVADVGLVGLPNAGKSTLLSAITLAKPDIADYPFTTLIPNLGRLGGDPSLGAGMYSSEVTLADLPGLIEGAHLGKGLGRNFLRHLRRTRLLVHVVDAATEDPINDYRTVREELRMYNPEYLERPYIVVLNKIDIPEVTEQLPSLAEEILKSLSNEDDKNERKIEDYPRPLSVVGVSVLKRIRVNEMLKEIRAALKKCRNPNEELGLGVPP 469
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g01959 469 PANTHER GTP-BINDING PROTEIN OBGC2-RELATED 421 460 - -
Bva06g01959 469 SUPERFAMILY Obg GTP-binding protein N-terminal domain 66 229 IPR036726 -
Bva06g01959 469 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 263 456 IPR027417 -
Bva06g01959 469 ProSiteProfiles OBG-type guanine nucleotide-binding (G) domain profile. 262 454 IPR031167 GO:0005525
Bva06g01959 469 Pfam GTP1/OBG 123 259 IPR006169 -
Bva06g01959 469 PANTHER DEVELOPMENTALLY REGULATED GTP-BINDING PROTEIN-RELATED 40 410 IPR045086 GO:0003924|GO:0005525
Bva06g01959 469 MobiDBLite consensus disorder prediction 79 110 - -
Bva06g01959 469 Gene3D - 261 462 IPR027417 -
Bva06g01959 469 Gene3D GTP1/OBG domain 65 260 IPR036726 -
Bva06g01959 469 PANTHER DEVELOPMENTALLY REGULATED GTP-BINDING PROTEIN-RELATED 421 460 IPR045086 GO:0003924|GO:0005525
Bva06g01959 469 MobiDBLite consensus disorder prediction 94 110 - -
Bva06g01959 469 Pfam 50S ribosome-binding GTPase 263 390 IPR006073 GO:0005525
Bva06g01959 469 ProSitePatterns GTP1/OBG family signature. 322 335 IPR006074 GO:0005525
Bva06g01959 469 PANTHER GTP-BINDING PROTEIN OBGC2-RELATED 40 410 - -
Bva06g01959 469 TIGRFAM small_GTP: small GTP-binding protein domain 263 432 IPR005225 GO:0005525
Bva06g01959 469 CDD Obg 262 453 IPR031167 GO:0005525
Bva06g01959 469 PRINTS GTP1/OBG GTP-binding protein family signature 285 303 IPR006073 GO:0005525
Bva06g01959 469 PRINTS GTP1/OBG GTP-binding protein family signature 320 335 IPR006073 GO:0005525
Bva06g01959 469 PRINTS GTP1/OBG GTP-binding protein family signature 337 355 IPR006073 GO:0005525
Bva06g01959 469 PRINTS GTP1/OBG GTP-binding protein family signature 264 284 IPR006073 GO:0005525
Bva06g01959 469 ProSiteProfiles Obg domain profile. 64 261 IPR006169 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g01959 Bva-Chr6 13231410 13235952 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g01959 - - jre:108991389 664.07
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g01959 06 13231410 13235952 Bva06g01959 06 13231410 13235952 ECH