Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g01956 atggaGATGGAGACGTATACACCCACCAATGCCGGCAAATCTAAGGAGGAGATGGAATCAAGCACTTTGGTAAGCAATGGATGTGTGGATATTCATGGTAGAATTGCTGACAAGCGAACAACTGGCGGATGGAAGGCATCTCCCTTTATTATAGTGAACGAGGTGGCGGAGAGGTTGGCATTTTTCTCAATAGCAGTAAACATGGTGGCTTACTTGGTGTTTGAAATGCATCAATCTCTGCCTGACGCTGCTACCCATGTCACTGACTGGATAGGAGCTGCCTACGTGCTCACCCTCCTCGGAGCATTCCTGGCCGATGCTTATCTGGGCCGCTTCAAaaccattattattttctccatCATATATGCTATGGGGATGGTTCTATTGACGGTGTCGGCCTCAGTGGACAGCCTTCGTCCGCCTCTATGCACGGCAAGACCATGCAAAGAAGCAACCCAAGGGCAAACGGCATTTCTATATTGGGCATTAGCCCTCATTGCCCTGGGAACAGGTGGAATCAAGCCGTGTGTATCGTCCTTTGGCGCAGACCAATTCGATGAGAGTGATTTAAAAGAGGCAGAAAACAAGTTCTCATTCTTCAATTGGTTCTTCTTCGCCATTAACATGGGTGCTATCCTGGGTCTCACTCTATTTGTTTACATTCAAGATAAAAAAGGGTGGGTTTGGGGTTTTGGAATCCCAACAGCCACCATGCTTTGCTCTGTTGTAATCCTATGCGCTGGTATCCAATTTTACCGCTACAAAAGCCCAATGGGTAGCCCATTCACTCGCTTCTTTCAGGTTCTGGTCGCCTCACTTCGTAATCATCTAAAAGGGGTCCCACATCCACGTCATTATCGCCTCTATGAGATCAGCACACCGGAGTCTGCCATTACCGGTGCTCCCAAGCTTCGTCACACCCAACAGTAcagCTTTCTGGACAAAGCAGCAGTTATAAGGGACACAGAGGACGTGGTAAGCGACAGGTGGCGTTTATGCACAGTGACACAAGTGGAAGAATTCAAGTCATTCATTAGAGTGCTTCCAGTATGGGCATCCACTATTGCTCTTTCTATATCATTTGCTCAATTCTCGACCTTCTTCATAAGCCAAGCAAATGTGATGGACCGGAGCATCGGACACAATTTCAAAATCCCAGCAGGCTCTGTGCCTGTGTTTAGCTCAATCAACGCTCTCATACTTGTTCCCATCTATGAAAAATTCATGGTCCCAATACTCCGGAAAAGCACAGGGCACCCCCGCGGCATCACATCTCTACAGAGAATGGGCCTTGGTCTGTTTGTGTCAATTTTTGCAATGGCTGCAGCAGCAGttgtggaaaagaaaaggcgTGACGACACCAAGCCCTTGGTTATGAGTGTGTTCTGGTTGTTTCCTCAGTATTTTCTGATGGGTAGTGCTGAAGTGTTCACATATGTGGGGCAGTTGGAGTTTTTCTACGACGAAGCAACGGAAGGGACGAGAAGCATTAGCAGTGCAATGTTTCTTTCTGAGATTGGGATTGGGAGCTGGTTAAGCACAGCCCTCGTAAAGATCGTTGAAGCTGCCACTGGTGGGCAGCAGGAAGGATGGCTTAGGAATGATCTTAATAAGAGCAAATTGGACTACTTTTACTGGATATTGACGGCTATTAATATCCTCAATTTCTTCGTTTACTTGTTTGTCGCATGGTGTTACAGAGGCAAAGGAGCACATGTCAGAGACGAGAACGTGGTTGAATTAGGTACAGTCTCTCAAGTTGATCAGCAACCAGAAGAATTCCATAGTGTCACgctatg 1799 0.4575 MEMETYTPTNAGKSKEEMESSTLVSNGCVDIHGRIADKRTTGGWKASPFIIVNEVAERLAFFSIAVNMVAYLVFEMHQSLPDAATHVTDWIGAAYVLTLLGAFLADAYLGRFKTIIIFSIIYAMGMVLLTVSASVDSLRPPLCTARPCKEATQGQTAFLYWALALIALGTGGIKPCVSSFGADQFDESDLKEAENKFSFFNWFFFAINMGAILGLTLFVYIQDKKGWVWGFGIPTATMLCSVVILCAGIQFYRYKSPMGSPFTRFFQVLVASLRNHLKGVPHPRHYRLYEISTPESAITGAPKLRHTQQYSFLDKAAVIRDTEDVVSDRWRLCTVTQVEEFKSFIRVLPVWASTIALSISFAQFSTFFISQANVMDRSIGHNFKIPAGSVPVFSSINALILVPIYEKFMVPILRKSTGHPRGITSLQRMGLGLFVSIFAMAAAAVVEKKRRDDTKPLVMSVFWLFPQYFLMGSAEVFTYVGQLEFFYDEATEGTRSISSAMFLSEIGIGSWLSTALVKIVEAATGGQQEGWLRNDLNKSKLDYFYWILTAINILNFFVYLFVAWCYRGKGAHVRDENVVELGTVSQVDQQPEEFHSVTL 599
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g01956 599 ProSitePatterns PTR2 family proton/oligopeptide symporters signature 2. 200 212 IPR018456 GO:0006857|GO:0016020|GO:0022857
Bva06g01956 599 ProSitePatterns PTR2 family proton/oligopeptide symporters signature 1. 101 125 IPR018456 GO:0006857|GO:0016020|GO:0022857
Bva06g01956 599 Gene3D MFS general substrate transporter like domains 15 575 IPR036259 -
Bva06g01956 599 PANTHER PEPTIDE TRANSPORTER 18 579 - -
Bva06g01956 599 Pfam POT family 112 531 IPR000109 GO:0016020|GO:0022857|GO:0055085
Bva06g01956 599 SUPERFAMILY MFS general substrate transporter 40 569 IPR036259 -
Bva06g01956 599 PANTHER OLIGOPEPTIDE TRANSPORTER-RELATED 18 579 IPR000109 GO:0016020|GO:0022857|GO:0055085
Bva06g01956 599 CDD MFS_NPF 48 563 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g01956 Bva-Chr6 13220375 13222923 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g01956 19 574 Organic Solute Cotransporters AT3G54140 47.887 0.0 540
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g01956 K14638 - jre:108991324 901.738
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g01956 06 13220375 13222923 Bva06g01956 06 13220375 13222923 ECH