Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g01954 ATGGAACATAAGTTTGATATGAAGCCCCACGgtgaaaatattgaagagTATGGAAGATTTTGCCGTGAGCGGACAAACAAATCTATGATTAAAAATCGACAAATTCAGGTCATTGATAATGCTCGCGGAGTTCTAATGAGGCCCATGCCTGGAATGGTTGGTCTAGTTTCATCCAGCTCAAagGATAACAAGAAGACACAGCCAGTTAAACAATCTGATACAAAGAGAACTAGAAGAGATCGCGGAGAGTTGGAGGATATAATGTTTAAGCTATTTGAAAGGCAGCCTAACTGGGCTTTAAAGCAGCTAGTCCAAGAAACTGATCAACCTGCACAATTCTTGAAGGAGATACTGAATGAACTGTGTATATACAATAAAAGAGGAGCCAATCAGGGGACTTACGAGCTCAAGCCCGAATACAAGAAATCAGTTGAAGATGCAAGTGCTGAATA 452 0.3916 MEHKFDMKPHGENIEEYGRFCRERTNKSMIKNRQIQVIDNARGVLMRPMPGMVGLVSSSSKDNKKTQPVKQSDTKRTRRDRGELEDIMFKLFERQPNWALKQLVQETDQPAQFLKEILNELCIYNKRGANQGTYELKPEYKKSVEDASAE 150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g01954 150 MobiDBLite consensus disorder prediction 50 81 - -
Bva06g01954 150 MobiDBLite consensus disorder prediction 66 81 - -
Bva06g01954 150 Gene3D - 76 143 IPR036388 -
Bva06g01954 150 SUPERFAMILY "Winged helix" DNA-binding domain 76 142 IPR036390 -
Bva06g01954 150 PANTHER GENERAL TRANSCRIPTION FACTOR IIF SUBUNIT 2 2 148 IPR003196 GO:0005674|GO:0006366|GO:0006367
Bva06g01954 150 PANTHER BNACNNG67730D PROTEIN 2 148 - -
Bva06g01954 150 Pfam TFIIF, beta subunit HTH domain 78 141 IPR040450 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g01954 Bva-Chr6 13205597 13207390 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g01954 K03139 - gmx:100788473 293.508
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g01954 06 13205597 13207390 Bva06g01954 06 13205597 13207390 ECH