Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g01934 ATGTCTGCGGTCGGAGCAGGAAACAAGGTTGAGGAAGAGAAGGAGGTGGTGAAAGGGGGAGAGCTCTTGTTCTGTGGCGCTACTTGTTGGGACATAATTGGTCGTCGCAAAGGCTCCGTCGAAGGCAACTTGGTCTCTCCAACAAGGCTTCGTCCTCTAGTTGGGATTGATATTCGATTCATTGCCTCTGGTTGCGCATCGTGTCACTGCGTGGCATTGGATGTCCAAGGGCGTTGTTATACATGGGGACGTAATGAGAAGGGGCAACTAGGTCATGGAGATACAATTCAGCGTGATAGGCCAACTGTGGTATCTGAACTTTCTAAatacaaaattatcaatgcTGGAGCAGGGAGGAGCCACACAGTGGTTGTTACAGAGGATGGACTCTCCCTTGCCTTTGGTTGGAATAAACATGGACAATTAGGTTCAGGTTCTGTTAGAAATGAAATTGAGTCATCTCCTGTCCGCTCTGCTGTGTCTGAAGTAAAAAACACTGCTTGTGGCGGTGACTTCACTGTGTGGCTATCTTCCATCGAAGGAGCTTCTATACTGACAGCAGGGCTTCCACAGTATGGGCAGCTTGGGCACGGAACAGATAATGAGTATAATTCTAAAGACAGCTCTGTAAAGTTGGTTTATGAAGCCCAACCACGTCCTCGAGCAATTACTACTCTTGCAGGGGAAACAGTAGTCAAAGTTGCATGTGGAACAAATCACACAGTGGCTGTGGATAAGAATGGCTTTGTTTACACGTGGGGTTTTGGTGGTTATGGAAGGCTAGGGCATAGGGAGCAAAAGGATGAGTGGGTCCCACGTCGTGTTGATGTGTTTCAGAACAGAAATGTTCTGCCTCCTGATGCAGTGATTTCTGCGGGTTCTGTTAACTCTGCATGTACTGCAGGTGGAGGACAATTATATATGTGGGGCAAAATAAAGAACACTGGTGATGACTGGATGTACCCAAAGCCTCTGATGGATTTAAGTGGTTGGAATTTACGATGCATGGATTCGGGCAACATGCACCATTTTGTTGGGGCTGATTCCTCGTGCATAAGTTGGGGCCATGCTCAGTATGGAGAGCTGGGATATGGCCCTAATGGACAGAAGTCTTCAGCTATACCCAAAAAGGTGGATGTTCTTGAGGGCATGCATGTCATTAGTGTTGCTTGTGGTATGGGTCATTCCATGGTTATTGTTGATAGAACAAATATCAGCGAACGACTTGACCAGTTTGATATATATGATGGCAAAGCCTCTGGTGAAGGGAACGAGGAACCTGCGAACAAAACTATAGTGCCTAAGCAGACTTCAAAAAAGAGCAAGAAAGGGGCTGATAATAATTccaagaagaggaagaagtcAAGAGATTTATCTGATTCAGAAGACGAAGAGGATTACGAAGAAAGTGAGGACAGCCAGGAACAAATCAATGGCGAGGCGGAGGGAAAAGGGGTAAAGGTCGAGGTAAGGCATCCAAAAAGTCAGCCGCCGATGGGAAAGGTTCTGGCCGAGGCCGTGGTCGCCCTCCTTCAGCATATAAGAACGCCGCTACGCCCTCTCAAACAACTGGTAAGAGTGGACGACCCCGGAAGTCGTGACTATTTGTTTTCCGTACTTGGATA 1625 0.4634 MSAVGAGNKVEEEKEVVKGGELLFCGATCWDIIGRRKGSVEGNLVSPTRLRPLVGIDIRFIASGCASCHCVALDVQGRCYTWGRNEKGQLGHGDTIQRDRPTVVSELSKYKIINAGAGRSHTVVVTEDGLSLAFGWNKHGQLGSGSVRNEIESSPVRSAVSEVKNTACGGDFTVWLSSIEGASILTAGLPQYGQLGHGTDNEYNSKDSSVKLVYEAQPRPRAITTLAGETVVKVACGTNHTVAVDKNGFVYTWGFGGYGRLGHREQKDEWVPRRVDVFQNRNVLPPDAVISAGSVNSACTAGGGQLYMWGKIKNTGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCISWGHAQYGELGYGPNGQKSSAIPKKVDVLEGMHVISVACGMGHSMVIVDRTNISERLDQFDIYDGKASGEGNEEPANKTIVPKQTSKKSKKGADNNSKKRKKSRDLSDSEDEEDYEESEDSQEQINGEAEGKGVKVEVRHPKSQPPMGKVLAEAVVALLQHIRTPLRPLKQLVRVDDPGSRDYLFSVLG 541
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g01934 541 PANTHER PROTEIN RCC2 7 482 IPR028641 -
Bva06g01934 541 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 77 128 IPR000408 -
Bva06g01934 541 ProSitePatterns Regulator of chromosome condensation (RCC1) signature 2. 115 125 IPR000408 -
Bva06g01934 541 MobiDBLite consensus disorder prediction 416 497 - -
Bva06g01934 541 PRINTS Chromosome condensation regulator RCC1 signature 250 264 IPR000408 -
Bva06g01934 541 PRINTS Chromosome condensation regulator RCC1 signature 78 94 IPR000408 -
Bva06g01934 541 PRINTS Chromosome condensation regulator RCC1 signature 112 125 IPR000408 -
Bva06g01934 541 PRINTS Chromosome condensation regulator RCC1 signature 234 250 IPR000408 -
Bva06g01934 541 PRINTS Chromosome condensation regulator RCC1 signature 131 147 IPR000408 -
Bva06g01934 541 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 349 402 IPR000408 -
Bva06g01934 541 Gene3D - 9 155 IPR009091 -
Bva06g01934 541 SUPERFAMILY RCC1/BLIP-II 18 403 IPR009091 -
Bva06g01934 541 Gene3D - 156 441 IPR009091 -
Bva06g01934 541 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 129 179 IPR000408 -
Bva06g01934 541 ProSitePatterns Regulator of chromosome condensation (RCC1) signature 2. 389 399 IPR000408 -
Bva06g01934 541 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 182 247 IPR000408 -
Bva06g01934 541 MobiDBLite consensus disorder prediction 439 460 - -
Bva06g01934 541 Pfam Regulator of chromosome condensation (RCC1) repeat 247 285 IPR000408 -
Bva06g01934 541 Pfam Regulator of chromosome condensation (RCC1) repeat 185 244 IPR000408 -
Bva06g01934 541 Pfam Regulator of chromosome condensation (RCC1) repeat 77 125 IPR000408 -
Bva06g01934 541 Pfam Regulator of chromosome condensation (RCC1) repeat 353 399 IPR000408 -
Bva06g01934 541 Pfam Regulator of chromosome condensation (RCC1) repeat 128 174 IPR000408 -
Bva06g01934 541 MobiDBLite consensus disorder prediction 461 476 - -
Bva06g01934 541 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 248 303 IPR000408 -
Bva06g01934 541 ProSitePatterns Regulator of chromosome condensation (RCC1) signature 2. 234 244 IPR000408 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g01934 Bva-Chr6 13100355 13106513 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g01934 - - gmx:100819842 841.262
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g01934 06 13100355 13106513 Bva06g01934 06 13100355 13106513 ECH