Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g01919 ATGGGGGCAAAGTCGAGGTCCAGAGGTTGTTGCGGTTGGTTTCTGGTGGTCGTCATTCTCGCTATCGTTGTCGCTGCCATTGTCCTCGtggtaaagaagaaaacagatcATTCCGATAAGCCAGCTCCGGTTCCTGGGCCACCCGGCGCCATTGATCAAAAATATGCCTCCTCTCTCAAAATTGCACTGCAATTCTTCGATATACAGAAATCTGGTAAGCTGgtcaacaataaaatatcttgGAGAGGGGATTCAGCTCTTAAGGATGGAAGCCAAGCACAATTGGATCTATCAAAAGGAATGTATGATGCTGGGGATCATATGAAGTTTGGTTTTCCGATGGCTTATACTGCCACAGTGCTATCGTGGGCAATCCTGGAATATGGAGATCAAATGGAGGCAGTTGATCAGTTGAAACCTGCTCTAGATTCGCTTAAATGGATTACCGACTATCTCATCAATGCTCATCATTCCGAAAATGTGCTTTACATTCAGGTTGGTGATCCTGTATCAGACCATAAATGTTGGGATAGGCCTGAAGATATGACTGAGCAACGCCCACTCATTCAGATCAACACAACTTGTCCTGGAACAGAAGTTGCAGCTGAAACTGCAGCAGCCATGGCCTCAGCATCCTTGGTCTTTAAAACAAGCGATCCTACGTATTCAAACAATCTACTTAAGCATGCAAAACAGTTGTTTAACTTTGCAGACAAATACCAGGGATCTTATAGTGAGAACATCCCGGAAGTTCAAACATATTATAACTCAACAGGCTTCCATGACGAGCTCTTGTGGGCAGCTAGCTGGCTCTATCATGCTACACATGATGATTCTTTTCTTGAGTATGTGACTGGCCAAAATGGAGAAGATTATGCTAATTTTGGAAGTCCAACCTGGTTTAGTTGGGATAACAAGCTTGCTGGAACTCAGGTTTTATTGTCCAGATTATCCTTCTTTAATGCCAAGGACATATCCAACTCATACAGCTCTGGCCTccaaaattatagaaaaacaGCTGAGGCTGTAATGTGTGGCCTCCTTCCAGATTCTCCAACAGCCACAAAAAGCAGAACAGATAATGGGCTGATATGGGTCAGTCAATGGAATGCTCTGCAGCATCCCGTTGCTTCTGCATTCTTAGCTGTCCTTTACAGTGACTATATGCTTACATCACGAactgtaaaattaaattgtgattCAGATTCCTTCACCCCAGCAGATCTTCGGAAATTTGCCAAATCTCAGGCCGATTATGTCTTGGGCAAGAATCCCATGGAAATGAGTTATCTGGTTGGATATGGGGATAAATTTCCAGAACATGTGCATCACAGGGGAGCTTCAATTCCAGCCGATTCCGAAACTGGGTGCAAAGATGGCTTCAAGTGGCTTGAATCATCCGATCCTAATCCGAACGTAGCCACTGGAGCACTTGTTGGCGGACCCTTCCTGAACGAGACGTACATTGACTCCCGGAACAATTCCGAGCAAGGGGAACCAAGCACTTATAATAGTGCCGTCATAGTTGGTCTTTTATCAAGTCTAGTTACCACATCTTCAGCAGTTCAATCCTTTACTTA 1580 0.4285 MGAKSRSRGCCGWFLVVVILAIVVAAIVLVVKKKTDHSDKPAPVPGPPGAIDQKYASSLKIALQFFDIQKSGKLVNNKISWRGDSALKDGSQAQLDLSKGMYDAGDHMKFGFPMAYTATVLSWAILEYGDQMEAVDQLKPALDSLKWITDYLINAHHSENVLYIQVGDPVSDHKCWDRPEDMTEQRPLIQINTTCPGTEVAAETAAAMASASLVFKTSDPTYSNNLLKHAKQLFNFADKYQGSYSENIPEVQTYYNSTGFHDELLWAASWLYHATHDDSFLEYVTGQNGEDYANFGSPTWFSWDNKLAGTQVLLSRLSFFNAKDISNSYSSGLQNYRKTAEAVMCGLLPDSPTATKSRTDNGLIWVSQWNALQHPVASAFLAVLYSDYMLTSRTVKLNCDSDSFTPADLRKFAKSQADYVLGKNPMEMSYLVGYGDKFPEHVHHRGASIPADSETGCKDGFKWLESSDPNPNVATGALVGGPFLNETYIDSRNNSEQGEPSTYNSAVIVGLLSSLVTTSSAVQSFT 526
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g01919 526 SUPERFAMILY Six-hairpin glycosidases 53 518 IPR008928 GO:0005975
Bva06g01919 526 ProSitePatterns Glycosyl hydrolases family 9 (GH9) active site signature 2. 419 445 IPR018221 -
Bva06g01919 526 PANTHER ENDOGLUCANASE 2 7 526 - -
Bva06g01919 526 Gene3D - 52 519 IPR012341 GO:0005975
Bva06g01919 526 Pfam Glycosyl hydrolase family 9 55 512 IPR001701 GO:0004553|GO:0005975
Bva06g01919 526 PANTHER ENDO-1,4-BETA-GLUCANASE 7 526 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g01919 Bva-Chr6 13030969 13035096 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g01919 1 525 Glycoside Hydrolase AT1G75680 71.212 0.0 713
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g01919 - - gmx:100820195 887.486
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g01919 06 13030969 13035096 Bva06g01919 06 13030969 13035096 ECH