Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g01899 ATGGGGAAGTCGACGGTCCCTTCTGCTCTTCTTCTACTGTgtctcctctttctcttcgCAGATCAAGGTCGGAAGTTTCAGGCTAATGCCGAGGCTGATTCCGAAGAGCTCGTAGACCCACCCAAGGTGGAAGAGAAGATCGGTGCTGTTCCAAATGGTTTATCCACCGATTCGGATGTGGCCAAGAGGGAAGCGGAGTCTATCTCCAAGAGATCGCTCCGGAGCAACacggagaagtttgagttcCAGGCTGAAGTGTCACGACTCATGGATATCATCATCAACTCCCTCTACAGCAACAAAGACATTTTCCTCAGGGAGTTGATCTCCAATGCTTCTGATGCATTGGACAAGATTAGGTTCCTCTCTCTCACAGATAAAGAGATTTTGGGTGAAGGTGATAGCACAAAGCTCGAAATCCTGATTAAATtagacaaggaaaagaaaatccttTCAATTCGGGACAGAGGTATAGGTATGACAAAGGAGGATTTGATAAAGAATTTGGGGACTATAGCAAAATCTGGAACTTCAGCATTTGTTGAGAAAATGCAGACTAGTGGAGATCTAAATCTTATTGGGCAGTTTGGAGTTGGCTTCTACTCTGTTTATCTTGTGGCTGACTATGTTGAGGTCATTAGCAAACATAACGATGATAAGCAGTATGTATGGGAATCGAAAGCTGATGGAGCTTTTGCTATTTCCGAAGATACTTGGAACGAACCACTAGGACGTGGAACTGAGATTAGACTACACCTCAGAGAAGAGGCTGGGGAATACTTGGAGGAGAATAAGCTTAGAGAATTGGTGAAGAAATACTCTGAATTCATCAACTTCCCTATCAATATGTGGGCAAGCAAAGAAGTTGATGTGGAGGTTCCTGCTGATGAAGATGAATCTAGTGATGAGGAGGAATCTTCATCTGAAAGCAGTTCTTCTGAGGAAGAAACTGAAGAGGAAGATACTGAGAAaggtgaagatgaagaaaagaagccCAAGACCAAAAAGGTGAAGGAAACAACCTATGAGTGGGAACTTTTGAATGATGTGAAAGCTATCTGGCTGCGGAATCCCAAGGAGGTTACGGATGAAGAGTACACCAAATTCTATCACTCTCTTGCCAAGGATTTTAGTGATGAGAAACCTTTGGCATGGAGTCACTTTACTGCTGAAGGTGATGTTGAGTTCAAGGCAGTCCTGTTTGTGCCACCTAAGGCACCTCATGATTTGTACGAGAGTTACTACAACTCAAATATCTCCAACCTGAAGTTGTATGTTAGACGTGTATTTATCTCAGATGAATTTGATGAACTGTTGCCAAAATACCTTAGCTTCTTGAAGGGTCTTATTGATTCTGACACATTGCCACTTAATGTTTCACGAGAAATGCTTCAACAACACGCTAGTTTAAAGACAATCAAGAAGAAACTCATCCGGAAAGCCCTTGATATGATCCGTAGGATTGCTGATGAGGATCCAGATGAATCCACTGACAAGGACAAGAAAGATGAAAAGTCCGTGGATGATGACGAGAAGAGAGGTCAATATACTAAGTTCTGGAATGAATTCGGGAAGTCTATTAAACTTGGTATTGTTGAGGATGCTACCAACAGAAATCGTTTGGCAAAACTACTTAGATTTGAGAGCACCAAGTCCGATGGCAAATTGACATCTCTCGATCAGTACATCTCTAGAATGAAACCTGGACAGAAGGACATCTTTTACTTAACTGGAACCAGCAAAGAACAACTGGAAAAATCTCCATTCCTTGAGCggcttaaaaagaaaaattttgagGTGATTTTCTTCACTGATCCAGTCGATGAATACTTGATGCAATACCTGATGGATTATGAAGATAAGAAATTCCAGAATGTGTCCAAGGAGGGTCTGAAACTAGGAAAGGATGGGAAAGACAAGGAGCTAAAGGAATCCTTCAAGGATCTTACCAAGTGGTGGAAGAAAGCCCTTTCCAGTGATAATGTTGATGATGTGAAGATATCCAACCGTTTGGATAACACACCTTGCGTGGTTGTTACATCAAAATTTGGTTGGAGTGCTAACATGGAGAGGATCATGCAGTCTCAAACGCTATCAGATGCTAGCAAGCAAGCATACATGCGTGGCAAGAGGGTTCTTGAGATCAATCCTAGGCACCCCATTATCAAGGAGCTCCGAGAGAGAGTAGTAAATAACCCCGAGgACGAGAGTGTGACGCAAACAGCACAGCTGGTGTATCAAACTGCGCTCTTCGAAAGTGGCTTCTCGTTAAATGATCCCAAGGATTTCACGTCCCGTATTTATGACTCAGTAAGGTCTAGCTTGAACATCAGTCCTGAAGCAGCAGTAGAAGAGGAGGATGATACCGAAGAAATTGAGGCCGAAAgtgacaaaaaagaaactacaTCGGCTGAAGGTGATGCGAATGACGATAATGCCGATGTCAGGGATGAGCTGTA 2459 0.4095 MGKSTVPSALLLLCLLFLFADQGRKFQANAEADSEELVDPPKVEEKIGAVPNGLSTDSDVAKREAESISKRSLRSNTEKFEFQAEVSRLMDIIINSLYSNKDIFLRELISNASDALDKIRFLSLTDKEILGEGDSTKLEILIKLDKEKKILSIRDRGIGMTKEDLIKNLGTIAKSGTSAFVEKMQTSGDLNLIGQFGVGFYSVYLVADYVEVISKHNDDKQYVWESKADGAFAISEDTWNEPLGRGTEIRLHLREEAGEYLEENKLRELVKKYSEFINFPINMWASKEVDVEVPADEDESSDEEESSSESSSSEEETEEEDTEKGEDEEKKPKTKKVKETTYEWELLNDVKAIWLRNPKEVTDEEYTKFYHSLAKDFSDEKPLAWSHFTAEGDVEFKAVLFVPPKAPHDLYESYYNSNISNLKLYVRRVFISDEFDELLPKYLSFLKGLIDSDTLPLNVSREMLQQHASLKTIKKKLIRKALDMIRRIADEDPDESTDKDKKDEKSVDDDEKRGQYTKFWNEFGKSIKLGIVEDATNRNRLAKLLRFESTKSDGKLTSLDQYISRMKPGQKDIFYLTGTSKEQLEKSPFLERLKKKNFEVIFFTDPVDEYLMQYLMDYEDKKFQNVSKEGLKLGKDGKDKELKESFKDLTKWWKKALSSDNVDDVKISNRLDNTPCVVVTSKFGWSANMERIMQSQTLSDASKQAYMRGKRVLEINPRHPIIKELRERVVNNPEDESVTQTAQLVYQTALFESGFSLNDPKDFTSRIYDSVRSSLNISPEAAVEEEDDTEEIEAESDKKETTSAEGDANDDNADVRDEL 819
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g01899 819 Gene3D - 637 782 IPR037196 -
Bva06g01899 819 SMART HKATPase_4 100 257 IPR003594 -
Bva06g01899 819 Gene3D - 349 541 - -
Bva06g01899 819 Hamap Chaperone protein HtpG [htpG]. 75 772 IPR001404 GO:0005524|GO:0006457|GO:0016887|GO:0051082|GO:0140662
Bva06g01899 819 Gene3D - 542 629 - -
Bva06g01899 819 PANTHER BNAA08G14800D PROTEIN 19 807 - -
Bva06g01899 819 MobiDBLite consensus disorder prediction 774 819 - -
Bva06g01899 819 PRINTS 90kDa heat shock protein signature 150 167 IPR020575 -
Bva06g01899 819 PRINTS 90kDa heat shock protein signature 168 185 IPR020575 -
Bva06g01899 819 PRINTS 90kDa heat shock protein signature 245 262 IPR020575 -
Bva06g01899 819 PRINTS 90kDa heat shock protein signature 193 215 IPR020575 -
Bva06g01899 819 PRINTS 90kDa heat shock protein signature 263 281 IPR020575 -
Bva06g01899 819 PRINTS 90kDa heat shock protein signature 78 98 IPR020575 -
Bva06g01899 819 PRINTS 90kDa heat shock protein signature 99 121 IPR020575 -
Bva06g01899 819 MobiDBLite consensus disorder prediction 795 819 - -
Bva06g01899 819 ProSitePatterns Heat shock hsp90 proteins family signature. 98 107 IPR019805 GO:0005524|GO:0006457|GO:0051082
Bva06g01899 819 PANTHER HEAT SHOCK PROTEIN 90 FAMILY MEMBER 19 807 IPR001404 GO:0005524|GO:0006457|GO:0016887|GO:0051082|GO:0140662
Bva06g01899 819 PIRSF HSP90_HTPG 50 814 IPR001404 GO:0005524|GO:0006457|GO:0016887|GO:0051082|GO:0140662
Bva06g01899 819 Pfam Hsp90 protein 259 801 IPR001404 GO:0005524|GO:0006457|GO:0016887|GO:0051082|GO:0140662
Bva06g01899 819 Gene3D - 65 302 IPR036890 -
Bva06g01899 819 MobiDBLite consensus disorder prediction 292 335 - -
Bva06g01899 819 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 101 256 IPR003594 -
Bva06g01899 819 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 77 287 IPR036890 -
Bva06g01899 819 MobiDBLite consensus disorder prediction 292 325 - -
Bva06g01899 819 CDD HATPase_Hsp90-like 87 277 - -
Bva06g01899 819 SUPERFAMILY HSP90 C-terminal domain 648 771 IPR037196 -
Bva06g01899 819 SUPERFAMILY Ribosomal protein S5 domain 2-like 350 629 IPR020568 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g01899 Bva-Chr6 12949538 12954556 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g01899 K09487 - gmx:100779976 1324.69
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g01899 06 12949538 12954556 Bva06g01899 06 12949538 12954556 ECH