Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g01895 ATGGACACGAACAGTCCACCCCCCTGCCCTAACACGGTGACTGTTCGTCGGAATCCTCACCGGAAGGCTCGAGCTACACCTGCAACTGCTCCAATAAAGTACTCATCATACCCAGATTTGCCGGAAATTTCCGTATTTCCACGTAAGGAAATTTTGTCTGCAGGACCAGAGAATCCTCCATTAGAACCCCCTTCAAAACATATAAGAGAATCAAAGAACATCAAAGTTTTTATCAGAATTCGGCCCATCTTAGCATCCAAGGGTTCTGGTAAAGTGAGTGTTATTGCTGGTTCGAAAGCTAAATCTGCGTGGCCCCAAAAcccagcaaaaaaaaatacagtagCAGGGGAGAAGAATGTTGAGAGGAAAAGCTCCAGAGTCTGTGTAAATGTCAACGATTCACAGACAGTGACACTATCACCTCCAATAGATTTGCAGGACTCTAAGAGAATTAAGTCAGAGACTTATGGAGGCTTTTCTCATGTATTTTCTTCAGATTCGTCTCAAGTTGAAGTGTACGAGAGAATGGTGAAACCAATAGTAGAGGACTTCCTTGATGGTACAAGTGGAATGCTGGCTGCATTGGGGCCTAGTGGGTCTGGCAAGACGCATACCGTATTTGGATGCGTAAGGGAACCGGGCATGGTGCCGCTGGCCCTTAGACGAATTTTGGAAGAGAATCAATCATCGAGGTCATTTTACATAACAATGTTTGAGATATATTCTGAACGAGGTAAAGTAGAGAAGCTGTTCGATTTATTACAAGATGGAGCTGAACTAAGCATGCAGCAATCAAATGTAAAATGCCTGAAGGAGGTCCTCGTTTCTGATGCCGGACATGCAGAATCCTTATTAGCAAAAGCAATGTTAAAACGCGCCACCGCGGTGACAAAAACTAACAGTCAATCAAGCCGGTCACAATGCATAATAAACATTCATGCTATTCCCAAAAAGTGTGAAGGAGTGAGTGCTCAACCAAATCCTGCTGTTTTGACTATCATTGACCTTGCTGGAGCAGAAAGAGTAAAGAAAACGCGGAATCAGGGAACGAGATTGCTTGAAAGCAATTTTATCAATAACACGTTGGTGGTGTTTGGCATGTGCTTAAGATCCCTATTGGAGCACCAAAAGAATCCTAAGAAGCCATTGCAAAAGCACTTCCAAAATTCTATGTTAACCAGGTACTTGCGAGATTATTTGGAGGGCAAGAAGCGCATGACCTTGTTATTAACGGCAAAACCAGGAGAAGAAGATTATCTTGATACATCTCATTTGCTCAGACAAGCTTCTCCGTACATGAAAATCAAGTACGATGATGCTGAACCATCAAATGTGGTTCCTAACAAAAGGCAATACCAATCTTCATCCACAATGGAGCATGTGAAACCATCATCTATGTTGGGGAATGCAAAGCGAATTAGGCTTGTTTGCTGTGAAGATAGTaatgaagaaaaggGTGCTGAAGAAAGGCACATTTCTGAAGAAGAGGCTTCAAAAGTCCGGGAATCAGATGCAAATAATTGTATCCCCTTGAAGTCGGAGTGTAGAAGCCGGCCAGGAAGTGAGAGAAACCATATTATCATGCAGAATTTTGCTAAGGCTATGTTGAGTGTTCTTAAGCAATATAATGCTAAATTGAAGGTGGCAGAACTGGaaattcaaaagcaaaagcaaaactaTCTGGAGCTGCAAAAAGATTTCAACGAGTTTAAGGCTTGTTGCACTTGTTGGAAATTAGGGAATGTAGATAATGATTTTCAGTCGCAACTTGGGTTGGATGGACTTAGACCTAGTAATGTTGATGAGGTAAATTACAGAGCTGTTGATCCAGATCCAAACAAGGTCAAATGTGTTGACAATGAGCAAAAATCTGAGCAAGCATTTGACGCGCAAGCATTTGACGCACAAGCATCACCTGAGAAAGGTATTTCAGTTTCCCAGTGCTGCAGCATTCTTGATCAATCCAATGAAGAGCCCAGATTTGGTACTTTCCCTGAAAATTCATCTAGGGAAGTTTCGGTTTCCTCATCCAAATCAGAAGATCTTAATGCTTTAGACTTAGAGATAGAGAGCCATAAATTCACTCAAGCATTTGATGTGCAAGTGTCCCCTGAGAAAGACATTTCAGTTTCCCAGTGCTGTAGCATTCTTGATCAATCAGATGAAGAGCCTAGACTTGGTACTTCCCCTGAAAATTCATCTAGGGAAGTTTTGGCCTCGGCATCCAAACCAGAGGATCTTAATGCTTCGGAGGTAGAGATAGAAAGTCATAAACTAAATCAAGTGTCACCTGTGAAAGACATTTCAGTTTCCCAGTGCTGCAGCATTCTTGATCAATCAGATAAAGAGCCTAGACTTGGTACTTCACCAGAAAATTCATCTAGGGAAGTTTCAGTCTCCTCATCCAAACCAGAGGATCTTAATGCTTTGGAGGCAGAGATAGAGAGCCATAAACTAACTGAAGCATTTGATGCGCAAGCATCACCCGATAAAGACATTTCAGCTTCCCATTACTGCAACATTCTTGATTTATCAGATAAAGAACCTAGACTTGATACTTCTCCTGAAAATTCATTTAGGGAAGTTTCGGCCTCCTCATCCAAGCTAGAGCATCCTAATGCTTTGGAGGTAGAGACAGAGATTGAATTATTGGTTTCTTCGCCGTTTCCCAAGTATGAAGCGTCGGATCCTTCCTTACCCAAAGACGCTGCTCCTCCTAAAGAATGTGACCTTAGAGATGAGCCCAAGAGAGATCATACAATGGCCACTACCTCATCCAACGCTGAGAGGCCGAAAAGGAGAATCATGCCTTCTTCCATGTTATTAAGGGATTTGAGTAACCTGGATCGTGCTGATGAGACCGAGAaaccaaaaGGGAGTAGGGGCTCAAAGAAGTTGGCTGCAGGGGATCTCAAAAGAACAAATGGTAGCGTAAACCTCATCCGCTTGTTGAAGAGCAATCGTCATAcctg 2972 0.4176 MDTNSPPPCPNTVTVRRNPHRKARATPATAPIKYSSYPDLPEISVFPRKEILSAGPENPPLEPPSKHIRESKNIKVFIRIRPILASKGSGKVSVIAGSKAKSAWPQNPAKKNTVAGEKNVERKSSRVCVNVNDSQTVTLSPPIDLQDSKRIKSETYGGFSHVFSSDSSQVEVYERMVKPIVEDFLDGTSGMLAALGPSGSGKTHTVFGCVREPGMVPLALRRILEENQSSRSFYITMFEIYSERGKVEKLFDLLQDGAELSMQQSNVKCLKEVLVSDAGHAESLLAKAMLKRATAVTKTNSQSSRSQCIINIHAIPKKCEGVSAQPNPAVLTIIDLAGAERVKKTRNQGTRLLESNFINNTLVVFGMCLRSLLEHQKNPKKPLQKHFQNSMLTRYLRDYLEGKKRMTLLLTAKPGEEDYLDTSHLLRQASPYMKIKYDDAEPSNVVPNKRQYQSSSTMEHVKPSSMLGNAKRIRLVCCEDSNEEKGAEERHISEEEASKVRESDANNCIPLKSECRSRPGSERNHIIMQNFAKAMLSVLKQYNAKLKVAELEIQKQKQNYLELQKDFNEFKACCTCWKLGNVDNDFQSQLGLDGLRPSNVDEQAFDAQAFDAQASPEKGISVSQCCSILDQSNEEPRFGTFPENSSREVSVSSSKSEDLNALDLEIESHKFTQAFDVQVSPEKDISVSQCCSILDQSDEEPRLGTSPENSSREVLASASKPEDLNASEVEIESHKLNQVSPVKDISVSQCCSILDQSDKEPRLGTSPENSSREVSVSSSKPEDLNALEAEIESHKLTEAFDAQASPDKDISASHYCNILDLSDKEPRLDTSPENSFREVSASSSKLEHPNALEVETEIELLVSSPFPKYEASDPSLPKDAAPPKECDLRDEPKRDHTMATTSSNAERPKRRIMPSSMLLRDLSNLDRADETEKPKGSRGSKKLAAGDLKRTNGSVNLIRLLKSNRHT 967
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g01895 967 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 66 436 IPR027417 -
Bva06g01895 967 SMART kinesin_4 71 443 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Bva06g01895 967 Pfam Kinesin motor domain 138 431 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Bva06g01895 967 MobiDBLite consensus disorder prediction 923 945 - -
Bva06g01895 967 MobiDBLite consensus disorder prediction 824 843 - -
Bva06g01895 967 MobiDBLite consensus disorder prediction 1 33 - -
Bva06g01895 967 MobiDBLite consensus disorder prediction 443 465 - -
Bva06g01895 967 ProSiteProfiles Kinesin motor domain profile. 73 435 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Bva06g01895 967 MobiDBLite consensus disorder prediction 880 897 - -
Bva06g01895 967 PANTHER KINESIN-LIKE PROTEIN KIF23 71 751 - -
Bva06g01895 967 Coils Coil 532 566 - -
Bva06g01895 967 MobiDBLite consensus disorder prediction 865 954 - -
Bva06g01895 967 MobiDBLite consensus disorder prediction 446 463 - -
Bva06g01895 967 MobiDBLite consensus disorder prediction 697 723 - -
Bva06g01895 967 MobiDBLite consensus disorder prediction 757 782 - -
Bva06g01895 967 Gene3D Kinesin motor domain 65 441 IPR036961 -
Bva06g01895 967 PRINTS Kinesin heavy chain signature 330 348 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Bva06g01895 967 PRINTS Kinesin heavy chain signature 297 314 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Bva06g01895 967 PRINTS Kinesin heavy chain signature 385 406 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Bva06g01895 967 PRINTS Kinesin heavy chain signature 187 208 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Bva06g01895 967 PANTHER KINESIN-RELATED 71 751 IPR027640 GO:0003777|GO:0007018
Bva06g01895 967 MobiDBLite consensus disorder prediction 767 782 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g01895 Bva-Chr6 12930126 12938578 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g01895 155 453 Miscellaneous Gene Families AT2G21380 31.210 4.15e-26 114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g01895 K10401 - gmx:100794655 849.736
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g01895 06 12930126 12938578 Bva06g01895 06 12930126 12938578 ECH