Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g01893 ATGATATCGGACGGAATCGAGGACGAAGAAAAATGGCTTGCAGAGGGGATAGCCGGCATTCAACTCAATGCATTTTACTTGCATCGCTCTCTGGATGACAATAATCTCAGAGAAGTCCTAAAATTCTCAGCTCAGATGCTCTCCGAGCTTCGAACTTCTAAACTTTCACCTCACAAATATTATGAACTATATATGAGAGCTTTCGACGAGTTGAGGAGGTTGGAGATGTTTTTCAAAGATGAAAGCAGGCATGGCGTTTCCATAGTTGATTTATATGAGCTTGTTCAGCACGCTGGAAATATATTGCCTAGACTGTATCTCCTTTGTACGGTAGGATCTGTTTACATCAGATGTAAGGATGCCCCGGTCAAGGATGTTCTTAAAGATCTTGTCGAAATGTGTGTTGGTGTTCAACATCCAATACGTGGCCTCTTTCTCCGGAGTTACCTTTCTCAAGTCAGTAGAGATAAGTTGCCTGATATTGGTTCTGAATATGAAGGGGATTCTGAGAGTGTGACGGATGCTGTTGAATttgttttacaaaattttatagaaatgaATAAACTTTGGGTTAGATTGCAGCATCAGGGACCTAGTCGGACAAAAGAGAAGAGGGAAAGGACTGAGCTTCGCGATCTTGTAGGAAAGAATCTTCATGTTCTGAGTCAGATAGAGGGTGTGGACCTTGAAATGTACAAAGATACTGTTCTTCCAAGGGTTTTAGAGCAGATTGTCAACTGTAAAGATGAGCTTGCTCAATCTTACCTGATGGAGTGCATCATTCAGGTCTTTCCAGATGAGTACCACTTGCAGACTCTTGAGACACTGTTAGGTGCTTTCCCCCAACTGCAGCCAACAGTGGACATCAAGACAGTATTATCTCAGTTAATGGAACGGTTGTCGAATTATGCTGCCTCAAATGCAGATGTATTGCCTGAATTTCTGCAAGTGGAAGCATTTGCAAAATTAAGCAGTGCAATTAGCAGGGTGATAGAAGCACAGGTCGACATGCCTATGGTTGGAGCAATCGATTTGCATGTCTCTCTCCTTACATTTACCCTCCGTGTTCATCCAGATAGACTTGATTATGTTGATCAAGTGCTGGGAGCTTGTGTCAAGAAGCTTTCTGGAAAACCTAAGCTTGATGACAATAGAGCAACAAAACAAATTGTTGCACTTTTAAGTGCTCCATTGGATAAATACAATGATATCGTTACAGCTTTGACACTGTCAAATTATCCACTTGTGATGGACCATCTTaataatgaaacaaataaagtaaTGGCCATGGTTATCATCCAAAGCATAATGAAGAATAATACTTGCATCTCTACTGCTGATAAGGTTGATGTGttatttgaattgataaaAGGGCTTATCAAGGATTTGGATGGAACAGCAGTGGATGAGGTTGATGAAGAAGATTTCAACGAGGAACAAAATTATGTGGCCCGCCTAATTCATATGCTTCAAAATGGGGACCCAGAGGAAATGTTAAAGATCATCTGTACCGTGAAGAAGCACATAATGGGTGGAGGACCAAGACGCCTACCTTTCACAGTTCCGGCCCTTATATTTTCTGCACTGAGGTTGGTTAGACAATTGCAAGGGCAGGATGGAGATGTAGTTGGAGGAGAAGTTTCTACCACaccaaaaacaatatttcagCTCTTGAACGAGGCAATTGAAAGTCTTTCTTCTGTACCATCTCCTGAACTGGCATTGAGACTATATCTGCAATGCGCTGAGGCTGCTAACGACTGTGATCTTGAGCCTGTTGCTTATGAGTTTTTTACTCAAGCATTTGTATTATACGAGGAAGAAATTGCGGACTCCAAAGCTCAGGTAACTGCAATACATTTAATCATAGGGACCCTTCAAAAGATGAATGTCTTCGGTATCGAGAACAGGGATACTTTAACACACAAGGCCACAGGGTATTCAGCAAAACTTCTGAAGAAACCTGATCAATGCCGAGCAGTTTATGCGTGCTCTCATCTCTTCTGGGTTGATGATCCAGATGGTATCAAGGATGGAGAAAGGGTATTGCTTTGCCTTAAACGTGCCTTGAGGATTGCCAACGCTGCTCAGCAAATGGCCAATGTAACAAGGGGTAGCAGTGGTCCAGTAACGCTATTTGTTGAAATACTGAACAAGTATTTGTATTACTTTGAGAAAGGAAACCCGCAGATCACAAGTGCTACAATCCAAAGCCTGATAGAATTAATCAAGACTGATTCTTCATCGCCCCTTCCGGCTTCAGATGCTTTCTTTGCCGGCACATTGCGGTATATACAGTTCCAAAAGCAGAAAGGTGGTTTATTGGGTCAGAAATATGATTCTATTGAGGTTTG 2354 0.4104 MISDGIEDEEKWLAEGIAGIQLNAFYLHRSLDDNNLREVLKFSAQMLSELRTSKLSPHKYYELYMRAFDELRRLEMFFKDESRHGVSIVDLYELVQHAGNILPRLYLLCTVGSVYIRCKDAPVKDVLKDLVEMCVGVQHPIRGLFLRSYLSQVSRDKLPDIGSEYEGDSESVTDAVEFVLQNFIEMNKLWVRLQHQGPSRTKEKRERTELRDLVGKNLHVLSQIEGVDLEMYKDTVLPRVLEQIVNCKDELAQSYLMECIIQVFPDEYHLQTLETLLGAFPQLQPTVDIKTVLSQLMERLSNYAASNADVLPEFLQVEAFAKLSSAISRVIEAQVDMPMVGAIDLHVSLLTFTLRVHPDRLDYVDQVLGACVKKLSGKPKLDDNRATKQIVALLSAPLDKYNDIVTALTLSNYPLVMDHLNNETNKVMAMVIIQSIMKNNTCISTADKVDVLFELIKGLIKDLDGTAVDEVDEEDFNEEQNYVARLIHMLQNGDPEEMLKIICTVKKHIMGGGPRRLPFTVPALIFSALRLVRQLQGQDGDVVGGEVSTTPKTIFQLLNEAIESLSSVPSPELALRLYLQCAEAANDCDLEPVAYEFFTQAFVLYEEEIADSKAQVTAIHLIIGTLQKMNVFGIENRDTLTHKATGYSAKLLKKPDQCRAVYACSHLFWVDDPDGIKDGERVLLCLKRALRIANAAQQMANVTRGSSGPVTLFVEILNKYLYYFEKGNPQITSATIQSLIELIKTDSSSPLPASDAFFAGTLRYIQFQKQKGGLLGQKYDSIEV 784
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g01893 784 PANTHER VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN 35A 2 784 - -
Bva06g01893 784 PIRSF Retromer_Vps35 3 783 IPR005378 GO:0015031|GO:0030906|GO:0042147
Bva06g01893 784 SUPERFAMILY ARM repeat 206 750 IPR016024 -
Bva06g01893 784 Gene3D - 464 769 IPR042491 -
Bva06g01893 784 Pfam Vacuolar protein sorting-associated protein 35 12 745 IPR005378 GO:0015031|GO:0030906|GO:0042147
Bva06g01893 784 PANTHER VACUOLAR SORTING PROTEIN 35 2 784 IPR005378 GO:0015031|GO:0030906|GO:0042147
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g01893 Bva-Chr6 12917085 12924188 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g01893 K18468 - gmx:100778365 1345.49
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g01893 06 12917085 12924188 Bva06g01893 06 12917085 12924188 ECH