Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g01890 ATGGCAGTTCAGGCCCAGTTTTATTCAGAAAATTCAGGATTACCAAATTGCTTTCAGGATTGGCCGAGCATTCCTGTTTGTGGAATTGATAATGGCCTCATTTTCGTTCTTCCAAATGCGCCTCAACAATCTCAGTTTCAACCCCATCATCAAAACAACCAAAGCTTCGGTTTTGATTGCAATCAGAGGACTTCCTCTTCTTCCACTTGCAATAGCTTTCCGTCTATGGCACTTTCTCATGCTTTAAGTGCCCAGCTAGAGCTACAGAGACATGAGATGGACTACATTCTTCTTTCACAGAACGAGAAACTAAGACATGCTCTGCATAATCAAAGAAATGAACAAGTGGCAATGCTGTTGAGTAGTCTTGAATCAAAATCCCTGAGCTTGATCAGGCAAAAAGAGGAAGATTTGACGCAAGCAACAAACAAGACTATAGAGCTCGAAGATCACTTGAGGAAAGCAGAAATGGAAAGCGAAGCATGGCAGAGATTAGCCAAGGAAAACGAAGCCATGATTGCAAACCTGAGCAACACGCTTGAGCAGGTAAGAGAAAGAATGGTTTTGGTTAGTAACAAAGGCGAAGATACAGAATCGTGCTGTGGTCCTTGTGAGAGAAGAAATAGTAAAGAGGAAGAGATGGAGAGTCTAAGGCAGAGAATGGCTTGTAAAGGCTGTAACTCTAGGAGCTCGTGCCTAGTGTTTCTACCTTGCAGACACCTCTGCTGCTGCTATTTCTGTGAAGCTTTGCTTGATTTTTGCCCAGTATGTAAATCTGCAAAAGAGGGTTGCATGGAGGTGTTTCTAGCATA 812 0.4286 MAVQAQFYSENSGLPNCFQDWPSIPVCGIDNGLIFVLPNAPQQSQFQPHHQNNQSFGFDCNQRTSSSSTCNSFPSMALSHALSAQLELQRHEMDYILLSQNEKLRHALHNQRNEQVAMLLSSLESKSLSLIRQKEEDLTQATNKTIELEDHLRKAEMESEAWQRLAKENEAMIANLSNTLEQVRERMVLVSNKGEDTESCCGPCERRNSKEEEMESLRQRMACKGCNSRSSCLVFLPCRHLCCCYFCEALLDFCPVCKSAKEGCMEVFLA 270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g01890 270 Coils Coil 166 193 - -
Bva06g01890 270 PANTHER BOI-RELATED E3 UBIQUITIN-PROTEIN LIGASE 3-RELATED 1 269 - -
Bva06g01890 270 Coils Coil 131 158 - -
Bva06g01890 270 PIRSF SBP1_RNase_bind 36 270 IPR017066 -
Bva06g01890 270 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 205 270 IPR013083 -
Bva06g01890 270 PANTHER SBP (S-RIBONUCLEASE BINDING PROTEIN) FAMILY PROTEIN 1 269 IPR017066 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g01890 Bva-Chr6 12907197 12908825 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g01890 K19042 - pvy:116141833 291.197
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g01890 06 12907197 12908825 Bva06g01890 06 12907197 12908825 ECH