Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g01889 ATGCAACAGGGAGATTACAGCTCCGCTCCATATTATCAATTCCCTCCTAATCCAGCGGATCCACACCCGAACCCTTACGCCTCCGCACCTCCGTTCAATTCCGGTTATGCTCCATCTGATCACACAGCTTACGCCTCCAATTATCAATCATTCCCGCAAAATCCCGATCCAGCTCCGACTCCTGCCCCTCCTACTGCTCCTTCATACCCGCCAACTTCCAACCCTAATTTGCAGTCATTCAATTCTtcttctcaggctccctcctTTTCTCCGTTTGAATCTCATATTCCATTACAACCACCATCGCAGCAGCAATCTTATTACCCCGCTTATGATCAGCATCAAACGACCCCTAGTTATACTCCTTCCCCCTCTGTTCCTCCTAATATTAATCCCAATTCTTCCTACTCGTCCTTGTACTCGACTTCGTACACTCACCCTGGATCTTCTGTGCCACCTACATACGAAAATCCTTATGAGAATCCCGTGAAAGTTGATGACGGTAGTACTTATTTCGATGACAGGTACGGAAGTTTTAACCGGAACCGGTCGGATTTGGGATCGGATTTGTATGGGAAACGGCAGGATAGCGGGCTTTCGAGGTATGATATTGGTCGCGATGAAGTTTACGGAGACGGTGTGTATGCTTATgaagggggaaaaaaggaACCTTATGGAGCTCGGGGTACGGCTTCTAAGTCTTCAACTTGGTCCGCCTTTGATGACTATGGGAGGCCAATCAGTTTTCCCTCTCCGAAAGAATCCTCTATGACAAGCAAGATTGCAAAAGCAGTGCCGAAGGCAGATGTCCAAGAAGATGTAAAAAGCGGGGTACAAAAATTTCGGGTTAAACTATTAGCAGAAAGTGGTGGTCAGAGCACCGTGGATGTTCTGTGTCAGATTGGTTTGGATGGAATTCGTATGCTGGATCCAAGTACCAGCCGTACATTGAGAATATACCCTCTTGAGAACATTACAAGATGTGAAAGATACGACTCATCTACCTTTGCATTTTGGTCCAAGACGTCTGTGGATATTGAGCCGAGACGAATCAGATTGCAATCCAATAGCTACACTACCAACACACTTCTGGATATTGTGACTGCGGCAATCATACAGTTCAAGGAAATGGGTGGGAGCAGGAGGCCTACTGAATCATTGAAAACAAATGAACAGCTagcagaaaagaagaaaggcctGGTTGATTGGATGAACTTGATGAAACCtgccaatgaagagaaagattTTTGGGTCCCGGATGAAGCGGTCTCAAAATGTACTGCATGTGGCACTGATTTCTCAGCTTTTGTTCGTAAGCATCACTGTAGGAACTGTGGGGATATTTTCTGTGACAAATGTACACATGGTAGAATTGCTCTAACTGCTGATGAGAATGCTCAGCCAGTACGAGTCTGTGACAAATGCATGGCAGAAGTAACTCAGAGGCTCAGTAATGCTAAAGAGGCAGCAATTAAGCCTGTGTTGCAGAGTCATGAAGATCTTGCCAGGAAACTTCAGGAGGAGCTGGAGAGGAATCGGAAGACATCAGGATCCAAATCTGATGGCTCTGGAAGACAGATGAAGGAAGTTGCATGTCCTACTTGCACCGTCCATCTGCAGGTCCAAGTACCTAGCTCAGGTTCGGAGACTATTGAGTGTGGGGTTTGTCAGCACCCATTTCTCGTGAGTGCTCATTA 1697 0.4425 MQQGDYSSAPYYQFPPNPADPHPNPYASAPPFNSGYAPSDHTAYASNYQSFPQNPDPAPTPAPPTAPSYPPTSNPNLQSFNSSSQAPSFSPFESHIPLQPPSQQQSYYPAYDQHQTTPSYTPSPSVPPNINPNSSYSSLYSTSYTHPGSSVPPTYENPYENPVKVDDGSTYFDDRYGSFNRNRSDLGSDLYGKRQDSGLSRYDIGRDEVYGDGVYAYEGGKKEPYGARGTASKSSTWSAFDDYGRPISFPSPKESSMTSKIAKAVPKADVQEDVKSGVQKFRVKLLAESGGQSTVDVLCQIGLDGIRMLDPSTSRTLRIYPLENITRCERYDSSTFAFWSKTSVDIEPRRIRLQSNSYTTNTLLDIVTAAIIQFKEMGGSRRPTESLKTNEQLAEKKKGLVDWMNLMKPANEEKDFWVPDEAVSKCTACGTDFSAFVRKHHCRNCGDIFCDKCTHGRIALTADENAQPVRVCDKCMAEVTQRLSNAKEAAIKPVLQSHEDLARKLQEELERNRKTSGSKSDGSGRQMKEVACPTCTVHLQVQVPSSGSETIECGVCQHPFLVSAH 565
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g01889 565 MobiDBLite consensus disorder prediction 72 120 - -
Bva06g01889 565 MobiDBLite consensus disorder prediction 54 71 - -
Bva06g01889 565 CDD FYVE_EEA1 417 479 - -
Bva06g01889 565 ProSiteProfiles Zinc finger FYVE/FYVE-related type profile. 420 480 IPR017455 -
Bva06g01889 565 PANTHER PROTEIN FREE1 1 565 IPR045893 GO:0036258|GO:0043130
Bva06g01889 565 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 406 485 IPR013083 -
Bva06g01889 565 PANTHER PROTEIN FREE1 1 565 - -
Bva06g01889 565 MobiDBLite consensus disorder prediction 1 169 - -
Bva06g01889 565 MobiDBLite consensus disorder prediction 39 53 - -
Bva06g01889 565 MobiDBLite consensus disorder prediction 130 156 - -
Bva06g01889 565 Pfam FYVE zinc finger 417 480 IPR000306 GO:0046872
Bva06g01889 565 SUPERFAMILY FYVE/PHD zinc finger 415 487 IPR011011 -
Bva06g01889 565 SMART fyve_4 412 481 IPR000306 GO:0046872
Bva06g01889 565 MobiDBLite consensus disorder prediction 14 28 - -
Bva06g01889 565 Coils Coil 495 515 - -
Bva06g01889 565 SUPERFAMILY PH domain-like 279 340 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g01889 Bva-Chr6 12899165 12903745 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g01889 388 493 EF-hand Containing Proteins AT3G14270 31.624 3.37e-14 74.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g01889 - - vvi:100259195 778.474
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g01889 06 12899165 12903745 Bva06g01889 06 12899165 12903745 ECH