Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g01876 ATGAAGGATGAAACTCAAGCACTGAAGGATGAAACTCAAGCACTGGAGAACGGTAAGGACTTCTCAAGTTCTAGATTTTCATGTCTGCTAGCCACGAAAGATCgtgattttcttctctctccaaCTGGCCTTCAGGTTAAAGTTTCTGATCTTGATGGCAAAGTTGTGGGTCTCTTATTCGCTGCCAACTGGTACCCACCATGCCGGAGCTTCACCCAAATGTTAGTTGGTATCTACGAGGAGCTCAAGAGCAGCGTCTCAGATTTTGAGATTGTGTACGTGTCCTCAGATGAAGACGCCGATGCCTTTAGTACCTATTATGGACACATGCCATGGCTTGCAACTCCATTCTCTGATttggaaacaaagaaagccTTGAACAGAAAGTATGACGTTGAAGGTATTCCCTGTTTGATTATATTGCAACCTGACGATAGTCAAGAGGATGCCACACTGGGTAATGGAGTTGAACTCGTTTATCGCTATGGAATCCAAGCTTATCCTTTCACTAACCAGAGGTTGGAGCAGCTTCAGAGGGAAGATAGAGAGAGGCATGAGAACCAgactttaattgatttactAACAAACTACAATAGGCACCATGTCTTGGGCCACCCGGGCCCCAAACAGGTACCTGTTGCTTCCTTAGTGGGTAAAACAATCGGACTCTATTTCTCAGCCCAATGGTGCGTGCCAGGCGCGAAATTCACTCCCAAACTGATCTCAATCTACCATAAGATAAAGCAGATGTTGGCTATAAATGGAAAGGACGAGGAATTTGAAATTGTGCTGGTTTCTAGCGACCGTGACCAAGCATCTTTTGACTCCTACTTCAGTAGCATGCCCTGGTTGGCATTGCCTTTTGGGGACCCagaaattaagaaacttgCGAGGCATTTCGACGTCCAAGGCATACCCTGCTTGGTGATTTTAGGCCCTGATGGAAAAACAATAACAAGACATGGAAGGAGCTTGATAAATTTGTACGAGGAAAATGCCTATCCTTTCACTAAGGCTAAGGTGGAGCAACTAGAGAAACAATTAGAGGAAGAGGCAAAAGGGCTCCCAAGTTTGGTATATCATCAAGAGCATCGCCACCAACTGAATTTGGTCTCAGATGGGAATGGAGGTGGGCCCTTCATTTGCTGTGTGTGCGAGGAACAAGGCTCCTGTTGGGCCTACCAATGTCTCGAATGTGGCTATGAAGTTCATCCAAAGTGCGTCAAAGCTGTGAATCGTGACTCAATTTCAGTCACTAACTA 1262 0.4342 MKDETQALKDETQALENGKDFSSSRFSCLLATKDRDFLLSPTGLQVKVSDLDGKVVGLLFAANWYPPCRSFTQMLVGIYEELKSSVSDFEIVYVSSDEDADAFSTYYGHMPWLATPFSDLETKKALNRKYDVEGIPCLIILQPDDSQEDATLGNGVELVYRYGIQAYPFTNQRLEQLQREDRERHENQTLIDLLTNYNRHHVLGHPGPKQVPVASLVGKTIGLYFSAQWCVPGAKFTPKLISIYHKIKQMLAINGKDEEFEIVLVSSDRDQASFDSYFSSMPWLALPFGDPEIKKLARHFDVQGIPCLVILGPDGKTITRHGRSLINLYEENAYPFTKAKVEQLEKQLEEEAKGLPSLVYHQEHRHQLNLVSDGNGGGPFICCVCEEQGSCWAYQCLECGYEVHPKCVKAVNRDSISVTN 420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g01876 420 Pfam C1 domain 364 408 IPR004146 -
Bva06g01876 420 ProSiteProfiles Zinc finger phorbol-ester/DAG-type profile. 365 415 IPR002219 -
Bva06g01876 420 ProSiteProfiles Thioredoxin domain profile. 28 179 IPR013766 -
Bva06g01876 420 SUPERFAMILY Thioredoxin-like 40 147 IPR036249 -
Bva06g01876 420 SUPERFAMILY Cysteine-rich domain 354 409 IPR046349 -
Bva06g01876 420 SMART c1_12 364 413 IPR002219 -
Bva06g01876 420 SUPERFAMILY Thioredoxin-like 209 321 IPR036249 -
Bva06g01876 420 Pfam Thioredoxin-like 53 144 IPR012336 -
Bva06g01876 420 Pfam Thioredoxin-like 218 316 IPR012336 -
Bva06g01876 420 PANTHER THIOREDOXIN 17 407 - -
Bva06g01876 420 CDD TryX_like_TryX_NRX 202 336 IPR045870 GO:0004791
Bva06g01876 420 Gene3D Glutaredoxin 30 170 - -
Bva06g01876 420 Gene3D Glutaredoxin 196 338 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g01876 Bva-Chr6 12835114 12837821 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g01876 K17609 - gmx:100815038 619.002
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g01876 06 12835114 12837821 Bva06g01876 06 12835114 12837821 ECH