Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g01866 ATGGCCACGGTCACATCTGCTGCCGTTGCAATTCCATCGTTCACCGGCCTTAAGGCAACTGGCACAGCCTCTGCCAAAGTTAACACCACAAGGGTGTCTGCTTCCCGCTGCAAGCGCAATGCCATGGCCTTTGAGGTCTTGCTTGGTGGTGGTGATGGgtctcttgttttctttcccaGTGATTTCTCCGTGAGCCCAGGAGAGAAAATCGTATTCAAGAATAATGCTGGTTTCCCACACAACGTTGTCTTCGACGAGGACGAGATCCCTAGCGGCGTTGATGCGTCAAAGATCTCCATGTCCGACGAAGACCTTCTCAATGCCCCCGGAGAGACTTATAGCGTTACCTTGAATGAAAAGGGAACCTACACTTTCTACTGTGCTCCTCATCAAGGCGCTGGTATGGTCGGAAAAGTAACTGTCAATTA 428 0.4883 MATVTSAAVAIPSFTGLKATGTASAKVNTTRVSASRCKRNAMAFEVLLGGGDGSLVFFPSDFSVSPGEKIVFKNNAGFPHNVVFDEDEIPSGVDASKISMSDEDLLNAPGETYSVTLNEKGTYTFYCAPHQGAGMVGKVTVN 142
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g01866 142 PANTHER PLASTOCYANIN 39 142 - -
Bva06g01866 142 SUPERFAMILY Cupredoxins 41 142 IPR008972 -
Bva06g01866 142 PRINTS Plastocyanin signature 72 90 IPR002387 GO:0005507|GO:0009055
Bva06g01866 142 PRINTS Plastocyanin signature 49 68 IPR002387 GO:0005507|GO:0009055
Bva06g01866 142 PRINTS Plastocyanin signature 121 140 IPR002387 GO:0005507|GO:0009055
Bva06g01866 142 Pfam Copper binding proteins, plastocyanin/azurin family 45 142 IPR000923 GO:0005507|GO:0009055
Bva06g01866 142 ProSitePatterns Type-1 copper (blue) proteins signature. 121 135 IPR028871 -
Bva06g01866 142 PANTHER PLASTOCYANIN MAJOR ISOFORM, CHLOROPLASTIC-RELATED 39 142 - -
Bva06g01866 142 TIGRFAM cyanin_plasto: plastocyanin 45 142 IPR002387 GO:0005507|GO:0009055
Bva06g01866 142 CDD Plastocyanin 45 142 IPR002387 GO:0005507|GO:0009055
Bva06g01866 142 PRINTS Type I copper blue protein family signature 119 133 IPR001235 GO:0005507|GO:0009055
Bva06g01866 142 PRINTS Type I copper blue protein family signature 63 76 IPR001235 GO:0005507|GO:0009055
Bva06g01866 142 PRINTS Type I copper blue protein family signature 78 93 IPR001235 GO:0005507|GO:0009055
Bva06g01866 142 Gene3D - 44 142 IPR008972 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g01866 Bva-Chr6 12784727 12785217 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g01866 K02638 - pvy:116123897 218.394
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g01866 06 12784727 12785217 Bva06g01866 06 12784727 12785217 ECH