Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g01831 ATGGTTTCTGCATCTGCCAAAGTTGGAAAAAATTCCAACCGTAAGAACGTTAAAAATGTGTATCACATCGGAGGTTTGCAGGTTGAATTCCCTTACGAACCATATGGTACTCAGTTTGCGTTTATGGGCAGAGTAATCTCCACCCTTGATCGAGCTCAGAGAGAAGGTCATTGTCACGCATTGCTCGAGTCTCCTACTGGTACTGGCAAATCTCTTTCGCTTCTCTGTTCCTCCCTCGCTTGGCAGCACAactataaattgaaaaaacagAATACCGATCTCTCTCATCTCAAGCCCCTTCCAGAGGCCACAATTGATCCTTTGGGCTACGGCGGTGGATTTGTTCCCGACGAGGTTTTCTCTACATCAGAAAATATGCAGCCGCCGGAATCTGAGCCTAACAAcaaaaagcagaagaaaaaagcCGCGCCGACTATATACTATGCATCGAGGACTCACTCACAAATCTCTCAAGTAATTCGTGAATTACGGAAAACTGCTTACAGGGTTCCTATGGCCGTGTTGGCATCACGGAAGCATTACTGCACCAATCAACATATAGTTGTCAAGGAGAATATTGATGAAGAATGTAAACTTCTTTTGAAAGATCAGGTAGTGGGATGTCCAGAATTCAAAAATGCCCATAAAGTCAAAGGCCACCCATCCATTCAGAGAGGAGGATGCAATGAGGTGCATGATATTGAAGATCTTGTGAAAATTGGGCAAGTGGTGAAAGGTTGCTCTTATTATGCAGCTCGTTCTATGTCAGATGACGCACAATTGGTATTTTGTCCTTATAGCTACATCATCAATCCAGTCATTCGGGGAGCTATGGATGTCGACATCAAAGGAGCCATCGTGATTCTTGATGAAGCCCACAATATAGAGGACATCACTCGTGATGCTGGGAGTGTGGATATTGAAGAAGACGTTTTAGATAaATTGCAAATGGAGCTACAGCAACTTTGTCCAGTCAATGCTTTGATTTATCAACCTTTATATGAAATGGCACAGGGCCTTACAAGTTGGATAgaacagaagaagaataaattagaGAAGCGTGATTTTCAACATTATGTATCTTGTTGGACTGGCGATAAGGCTTTGAGAGAGCTCCAAGAAGCGAATCTTACACAGCAGTGCTTCCCCATCTTGCTAGAATGCGCTACCAAGGCTATCAAAGTTGCTTCGGATTTGGAATCAGATGCACCACATTTAAGTGGCATGTCTGTGATAACATTGGAAGGTTTATTCTCGTCACTGACTTATTTCTTCTCTAGAAATGGGTCTCAAATGTTGGATTACCAGCTTGCTCTGCAgcgatttgttaaaaaagatgCTGGAACAACTCTCGTAAAATGGACCCATACTTTAAGTTTGTGGTGCTTGAATCCAGCAGTTGTGTTCAGAGATATTGCTGATCTTTCTTTGTCTGTCATTTTGACTTCTGGGACACTGTCACCAATGACTTCCTTTTCATCTGAGCTTGGACTTGAATTTGAATCTACTCTGGAAGCTCCACATGTAATTGATGTTAACTCACAGGTCTGGTCTGCCATAATCTCTACTGGTCCGGGTAATTATCCCTTGAACGCAAGTTACAAAACAGCAGATGGATATGCATTCCAGGATTCAGTCGGAAGATCTTTAGAGGAAATCTTCAAGGTTGTTCCAGGTGGTTGTCTTGTTTTCTTCCCAAGCTATAAATTGATGGAGAAACTATACCATCGTTGGTCCGAAACAGGTCAATGGTCTCGTCTAAATGCAGAAAAGTCCCTTTTTGTTGAACCAAGAGGAGGAAACCAGGATGATTTTGAACTCGTTTTAAAGGGGTATTATGACTCTATTCATCATGGCAATAGACCTGCATTGAGCAGGAAAACAAGGATTAAGAAAATTGGACTTAATCGCTCACATGCAGTCAATTCCCCTGAAAGTTCTAAGAAAGGAGGAGCTGCTTTACTTGGCGTCTGTCGAGGAAAGGTTTCCGAGGGAATCGACTTTTCTGATGATAATGCTAGAGTGGTTATTATTGTTGGTGTTCCATTTCCCAACATAAATGATGTTCAAGTTGCACTTAAGAAGAAGTACAATGACACATACAAATCATCCAAAAATCTTTTGACTGGAAATGAGTGGTACTGCCACCAAGCATTCCGAGCTTTAAATCAAGCAGCAGgacGTTGTATACGCCACAAGCTTGACTATGGAGCAATCATCTTATTGGATGAACGCTTTcgggaagaaagaaatagagcaTTCATTTCAAAGTGGCTAAGAAGAACCTTAAGAGTGTATGACAATTTTGACTTGACCATGGAGGGAATGAAATCGTTTTTTGAGCAAGTCAAGGAGCGATTTGGCATGAAAACAAGCAGTGCCGTAGAGAATTTGGGTTTAAAAGGGGAAGGCGACCAAACCAAGGATCAAAATAAGGGGttcacaagaaagaaaaataagaaactgaATAATTTTGGCGAGAAAGAAATATCAGTGATCAAGGATGATGGCTCCTTTCCCAAACCAAGTTCTCAAGGTCTTATTGAGAGTCAGCCATCAGCGACAAAGAATATTAACACTTACAGTGGTACTAAAGGCTATATTGATGTAGATGGCTGTGATAAGACCGAGATAAGAACCACTGGGACATTATCCATGGCAGTTACGCATGAAGAAACCTCCTTTGTCAAGGAAACCCCTCGCATGGATGGCGGCAGTGATCCTGTCAGCCCTGTCTGTTTTAAAGATGACGACTCGAGTTCCACCATAATTGAGGTCTCTGCCGAATTTCCAGGTCAATCATTTATCCTTCCAGTTTCTTTAGCTAATGGAAGTCAAGCTTCTTCAAAAGTTCGGTCTTCAATAACAGTTACCCCAGAAAAGAATGCAACTGCAAACAGCTGCCATACTCCAGAAATAGAATCATCTCTGAGTTTGAGTGTCAATTCTCACACCCAGAAAAGGAGAAAGTTCATGACTACACCGTTTATAGACCTTATTGAGGAAGAAAATTATAGTGCACCATGTACAAGCACTTCTACACGGTACACAACAAGCTCAACAGATTTTATGGAGGCAACTCCTGGAGCTGAAAGTTTTGAGGGGaatccgaagccaaatggtcCTCAGTTACTGACAAGCAGTCTTACTGGTTCACGTTTACTAACTGTCCCTCTCATGGACAAAAGTTTACGGATATTTTGCTCACGCTGCAAAAATCCATTAGGCCTACCTGAGAACCATCTATATGTTACATGCTCTTTGACCGCATCATCAAAAGTTCACTtaagatttcttttcaaacaGACATTGAAATCTCAAAAAGTCATGAAAGTGCTCCCGAAAAGGGTATTTGGTGTCAAGAAGATGGCTGTGTTTTTAGCTCTATTTTCTGTCCCTTCTGCAGTAATACCAACAATTTGCTTGGAGTACAGATCTTGGCAACTGATTCATCAAATATTCAGCTACTTGACAAGATATTACTTTTTGTTGATTCTTTGGAAGTTAAGAACCTTGAAGAATCAAGAAATGGATCTGAGGAAATGCGACTACCCAACAAGTAGTTTACCTCGTATATTTGGAATTGGAACTGTTCAAATAGATAGTTTCGCTGCGAAATTTGTGTTTACCAGGATTCCTCCATGTAGAGAGATTTCGCATCGTTGCCGCAGGGATAAGGAATGGTTGGCTTTCGTAActtg 3701 0.3983 MVSASAKVGKNSNRKNVKNVYHIGGLQVEFPYEPYGTQFAFMGRVISTLDRAQREGHCHALLESPTGTGKSLSLLCSSLAWQHNYKLKKQNTDLSHLKPLPEATIDPLGYGGGFVPDEVFSTSENMQPPESEPNNKKQKKKAAPTIYYASRTHSQISQVIRELRKTAYRVPMAVLASRKHYCTNQHIVVKENIDEECKLLLKDQVVGCPEFKNAHKVKGHPSIQRGGCNEVHDIEDLVKIGQVVKGCSYYAARSMSDDAQLVFCPYSYIINPVIRGAMDVDIKGAIVILDEAHNIEDITRDAGSVDIEEDVLDKLQMELQQLCPVNALIYQPLYEMAQGLTSWIEQKKNKLEKRDFQHYVSCWTGDKALRELQEANLTQQCFPILLECATKAIKVASDLESDAPHLSGMSVITLEGLFSSLTYFFSRNGSQMLDYQLALQRFVKKDAGTTLVKWTHTLSLWCLNPAVVFRDIADLSLSVILTSGTLSPMTSFSSELGLEFESTLEAPHVIDVNSQVWSAIISTGPGNYPLNASYKTADGYAFQDSVGRSLEEIFKVVPGGCLVFFPSYKLMEKLYHRWSETGQWSRLNAEKSLFVEPRGGNQDDFELVLKGYYDSIHHGNRPALSRKTRIKKIGLNRSHAVNSPESSKKGGAALLGVCRGKVSEGIDFSDDNARVVIIVGVPFPNINDVQVALKKKYNDTYKSSKNLLTGNEWYCHQAFRALNQAAGRCIRHKLDYGAIILLDERFREERNRAFISKWLRRTLRVYDNFDLTMEGMKSFFEQVKERFGMKTSSAVENLGLKGEGDQTKDQNKGFTRKKNKKLNNFGEKEISVIKDDGSFPKPSSQGLIESQPSATKNINTYSGTKGYIDVDGCDKTEIRTTGTLSMAVTHEETSFVKETPRMDGGSDPVSPVCFKDDDSSSTIIEVSAEFPGQSFILPVSLANGSQASSKVRSSITVTPEKNATANSCHTPEIESSLSLSVNSHTQKRRKFMTTPFIDLIEEENYSAPCTSTSTRYTTSSTDFMEATPGAESFEGNPKPNGPQLLTSSLTGSRLLTVPLMDKSLRIFCSRCKNPLGLPENHLYVTCSLTASSKVHLRFLFKQTLKSQKVMKVLPKRVFGVKKMAVFLALFSVPSAVIPTICLEYRSWQLIHQIFSYLTRYYFLLILWKLRTLKNQEMDLRKCDYPTSSLPRIFGIGTVQIDSFAAKFVFTRIPPCREISHRCRRDKEWLAFVT 1233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g01831 1233 Gene3D - 527 773 IPR027417 -
Bva06g01831 1233 SMART Cxpdneu3 568 748 IPR006555 GO:0003676|GO:0004386|GO:0005524|GO:0006139|GO:0016818
Bva06g01831 1233 MobiDBLite consensus disorder prediction 119 142 - -
Bva06g01831 1233 PANTHER FANCONI ANEMIA GROUP J PROTEIN 13 1105 - -
Bva06g01831 1233 SMART deadxpd 26 327 IPR006554 GO:0003678|GO:0016818
Bva06g01831 1233 ProSitePatterns DEAH-box subfamily ATP-dependent helicases signature. 285 294 IPR002464 -
Bva06g01831 1233 Gene3D - 35 348 IPR027417 -
Bva06g01831 1233 Pfam DEAD_2 148 311 IPR010614 GO:0003677|GO:0003678|GO:0005524
Bva06g01831 1233 CDD SF2_C_XPD 514 746 - -
Bva06g01831 1233 Pfam Helicase C-terminal domain 550 761 IPR006555 GO:0003676|GO:0004386|GO:0005524|GO:0006139|GO:0016818
Bva06g01831 1233 PANTHER DNA REPAIR DEAD HELICASE RAD3/XP-D SUBFAMILY MEMBER 13 1105 IPR045028 -
Bva06g01831 1233 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-2 domain profile. 24 362 IPR014013 GO:0005524
Bva06g01831 1233 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 54 742 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g01831 Bva-Chr6 12600182 12611626 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g01831 K15362 - gmx:100779610 1588.93
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g01831 06 12600182 12611626 Bva06g01831 06 12600182 12611626 ECH