Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g01830 ATGGCGGGGCCGAATATGGATCAGTTCGAAGCGTATTTCAGGAGAGCAGATTTAGATGGGgatggcagaatcagcggagCTGAAGCTGTTGCTTTCTTTCAGGGATCCAATTTGCCTAAGAACGTTCTTGCTCAGATATGGATGCATTCTGATCAGACCAAAAGTGGTTTCCTTGGGCGGGCAGAGTTTTTTAATGCTCTCAAATTGGTGACTGTGGCACAGAGTAAGAGAGATTTAACACCTGACATGGTGAAGGCAGCATTATATGGTCCGGCTGCTGCTAAAATCCCTGCACCACAGATTAATCTTGCTGCTATACCTCCGCCACAACCTACTCCTGTGGCTGCTGCTTCTGCTTTGCCAATGGGAGCAACTGCACCAACGCCATCTCAAATTTTTCCTTATAGAGGACAAGGATTATCAGGTTCAATTGTCAGCCAGATTCCTTCTCAGCAAAATCCGATTATGAGACCACCTCAACCCATTGCAAGTAGTGCTTCCCGTCCACTACAGGGTATTGCGGGTACAGATCTTTCTAGAGGGATTGGGATGGGAGGTCACAGTATGTCAAACTCAGGCATATCAAATGATTGGAATAGTGGAAGGACTGGTTCAGTTCCTCCTAGGACTGCAGGTCTGCCTCCATCAGTGCCCTCATCCACATCAACATCACAAGATCCATTTTCAATGATGTCACAGTCAACAACTATCAAAACTAAAGAACTAGTTGTTTCTGGAAATGGGTTCCCTTCCAATTCAGGCTTTGGCAATGATGTATTCTCCACTGCCTTGTCTACATCAAAACAAGAACCTCCTGGGCAGAATTATCCTGCTAGCGGCCCACCTGCCTCATCAACCATTGTTCCTATATCCAGTGGTGGCCAATCTGCTAGTAAGCACAGTGCACTTGATTCATTACAGAATGCATTCTCAATGCAGCCATTAAGCAGTCAGTTACAGCGGCCACGGTCACCATCAAACCCAAGCCAACAGATTTCAACACCAGCTTCTTCCTCATTTACACCATCAGTTGGACTTGGAAATAGTAATTCTGATAGTTCACAGCCTCCTTGGCCAAAAATGAAACCATCCGATGTGCAAAAGTATACAAAGGTGTTTATGGCAGTAGACACTGATAAGGATGGAAAGATCACTGGGGAGCAGGCTCGCAGTCTATTTTTAAGTTGGAGATTACCAATAGAGGTGTTAAAGAAGGTGTGGGACTTGTCTGATCAGGATAATGATAGCATGCTTTCTTTGAAGGAGTTTTGCTTTGCTCTCTATTTGATGGAGCGATATAGGGAAGGTTGCCCTCTTCCACCTTCTCTTCCAAGTAATGTTATGTTTGATGAGACACTGCTGTCTATGACAGGTCatccaaaaattatgcaagGAAATGCAACTTGGGGTTTAGGTCCAGgTTTTCAGCAACTACCGGTGATGTCAGGTGCCCGGCCAGTAGCACCTGCACCTGGTTTGAGACCACCAGTACAGGGAACTCCTCCCCGGGCTGATGGTATACTGCAATCCAATCAGCAAAGGCCGGGCACACCTGTGTTGGAGGATTCCTTTTTGAATAAAGCTGATAATGGTGAGcagaatatattaaattcaaagcCTCAAGAGGCAACAACTGCAGGGGAAAAGGCTGAAGATACAGGGAATGTGATATTGGATTCAAAAGAGAAGATTGAGTTCTACCGAAACAAAATGCAGGAACTAGTTCTATATAAAAGTAGATGTGATAATCGACTAAATGAGATCACAGAAAGGGCATCTGCAGACAAGCGTGAGGCAGAGTCACTGGccaaaaaatatgaagagaaGTACAAACAGGTAGCAGAGATAGCTTCCAAATTGTCTATTGAAGAGGCTAAATTTCGTGATACACAGGAAAGAAAGATGGAGTTGCAGCAGGCTATTGTCAAAATGGAGCAAGGAGGTAGCTCAGATGGAATTCTTCAGGTCCGTGCTGATCGTATACAGTCAAATCTTGAGGAGTTATTTAAGGCTTTAGCTGATCGATGCAGGAAACATGGCATAGAAGTGAAGTCAATTGCAATGGTTGAGCTTCCTATTGGTTGGCAACCTGGAATTCCAGAGGGAGCGGCTGATTGGGATGAAGATTGGGATAAATTTGAAGATGAGGGATTTGTCAGCGATCTCACAATTGATATGAAAAATGTCTCTTCAAAGCCGAAAGCATTTGTTGAACAAAATTTGACTGATGATAATTCAATCCATGCTTCATCAATGAATACAAATGGAAAGCAAGAAAATTCTGTAAGTAATGGTGATCACACGCTTGACGGTGAATCTGCATTCTCACACAGTGAAGATGACTTAACAAGAAGTCCTCGTGATAGTCCAGCTAGAAGAACACCTGTAGAGAGCCCGTCTcaagaattttcaaatgttCATTTTGGAAAAAGTTCTGAAGCGGATGCAGAAACACATAGAAGTTTTGATGAATCAACATGGGGTGCCTTCGACAATAATGATGATGTGGACTCGGTTTGGGGTTTTAACAGTGTTACTGCCAAGGACTCTGACCTGGAGAAGCAGGGAGATTTCTTCAGATCTGGTGATTTTAGTATAAACCCAGTTAGAACGGGATCTACACATACAGATGGCACCTTTCAGACTAAAAGCCCGTTCACCTTCGATGATTCGGTGCCCGGAACACCACTTTCCAAATTTGGAAACTCTCCAACATATAGTGAGGCAGGGGATCGCTTCTTTGATAACATGTCAAGGTTTGATTCCTTCAGCATGCATGACAGTGGATATTCTCCACAACCTGAGAGGCTTACGAGATTTGACTCTGTTAGTAGCAGCAGGGACTTTGGCTACAACCATGAGAAGTTCACAAGGTTCGATTCCACGAGTAGCAACCATGAGAAGTTCGCTAGGTATGATTCCATGAGTAGCAGCAGAGATTTTGGTTACAAGCCTGAAATGCTCTCAAGGTTTGACTCCATAGATAGCAGCAAGGATTTCGGGCACAGCGGTGCATTCTCCTTTGACGACGCTGATCCATTCGGCTCCACTGGCCCATTTAAGGTCTCTTCTTCAGATACTCAGTCCCCAAAGAAAGGTTCTGATAACTGGAGTGCATTCTG 3122 0.4324 MAGPNMDQFEAYFRRADLDGDGRISGAEAVAFFQGSNLPKNVLAQIWMHSDQTKSGFLGRAEFFNALKLVTVAQSKRDLTPDMVKAALYGPAAAKIPAPQINLAAIPPPQPTPVAAASALPMGATAPTPSQIFPYRGQGLSGSIVSQIPSQQNPIMRPPQPIASSASRPLQGIAGTDLSRGIGMGGHSMSNSGISNDWNSGRTGSVPPRTAGLPPSVPSSTSTSQDPFSMMSQSTTIKTKELVVSGNGFPSNSGFGNDVFSTALSTSKQEPPGQNYPASGPPASSTIVPISSGGQSASKHSALDSLQNAFSMQPLSSQLQRPRSPSNPSQQISTPASSSFTPSVGLGNSNSDSSQPPWPKMKPSDVQKYTKVFMAVDTDKDGKITGEQARSLFLSWRLPIEVLKKVWDLSDQDNDSMLSLKEFCFALYLMERYREGCPLPPSLPSNVMFDETLLSMTGHPKIMQGNATWGLGPGFQQLPVMSGARPVAPAPGLRPPVQGTPPRADGILQSNQQRPGTPVLEDSFLNKADNGEQNILNSKPQEATTAGEKAEDTGNVILDSKEKIEFYRNKMQELVLYKSRCDNRLNEITERASADKREAESLAKKYEEKYKQVAEIASKLSIEEAKFRDTQERKMELQQAIVKMEQGGSSDGILQVRADRIQSNLEELFKALADRCRKHGIEVKSIAMVELPIGWQPGIPEGAADWDEDWDKFEDEGFVSDLTIDMKNVSSKPKAFVEQNLTDDNSIHASSMNTNGKQENSVSNGDHTLDGESAFSHSEDDLTRSPRDSPARRTPVESPSQEFSNVHFGKSSEADAETHRSFDESTWGAFDNNDDVDSVWGFNSVTAKDSDLEKQGDFFRSGDFSINPVRTGSTHTDGTFQTKSPFTFDDSVPGTPLSKFGNSPTYSEAGDRFFDNMSRFDSFSMHDSGYSPQPERLTRFDSVSSSRDFGYNHEKFTRFDSTSSNHEKFARYDSMSSSRDFGYKPEMLSRFDSIDSSKDFGHSGAFSFDDADPFGSTGPFKVSSSDTQSPKKGSDNWSAF 1040
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g01830 1040 Coils Coil 585 640 - -
Bva06g01830 1040 MobiDBLite consensus disorder prediction 743 820 - -
Bva06g01830 1040 SUPERFAMILY EF-hand 5 84 IPR011992 -
Bva06g01830 1040 ProSiteProfiles EH domain profile. 5 95 IPR000261 GO:0005515
Bva06g01830 1040 Pfam EF hand 10 26 IPR002048 GO:0005509
Bva06g01830 1040 SMART eh_3 1 93 IPR000261 GO:0005515
Bva06g01830 1040 SMART eh_3 358 453 IPR000261 GO:0005515
Bva06g01830 1040 Gene3D - 4 95 - -
Bva06g01830 1040 MobiDBLite consensus disorder prediction 187 233 - -
Bva06g01830 1040 MobiDBLite consensus disorder prediction 772 791 - -
Bva06g01830 1040 MobiDBLite consensus disorder prediction 743 771 - -
Bva06g01830 1040 Pfam Cytoskeletal-regulatory complex EF hand 359 430 IPR000261 GO:0005515
Bva06g01830 1040 ProSiteProfiles EH domain profile. 365 448 IPR000261 GO:0005515
Bva06g01830 1040 CDD EH 369 435 IPR000261 GO:0005515
Bva06g01830 1040 MobiDBLite consensus disorder prediction 1019 1040 - -
Bva06g01830 1040 Gene3D - 346 450 - -
Bva06g01830 1040 MobiDBLite consensus disorder prediction 314 363 - -
Bva06g01830 1040 SMART efh_1 402 430 IPR002048 GO:0005509
Bva06g01830 1040 SMART efh_1 8 36 IPR002048 GO:0005509
Bva06g01830 1040 SMART efh_1 42 70 IPR002048 GO:0005509
Bva06g01830 1040 SMART efh_1 368 396 IPR002048 GO:0005509
Bva06g01830 1040 MobiDBLite consensus disorder prediction 314 360 - -
Bva06g01830 1040 PANTHER CALCIUM-BINDING EF HAND FAMILY PROTEIN 1 961 - -
Bva06g01830 1040 CDD EH 9 75 IPR000261 GO:0005515
Bva06g01830 1040 ProSiteProfiles EF-hand calcium-binding domain profile. 398 433 IPR002048 GO:0005509
Bva06g01830 1040 PANTHER EH DOMAIN 1 961 - -
Bva06g01830 1040 MobiDBLite consensus disorder prediction 187 206 - -
Bva06g01830 1040 PANTHER EH DOMAIN 959 1040 - -
Bva06g01830 1040 ProSiteProfiles EF-hand calcium-binding domain profile. 4 39 IPR002048 GO:0005509
Bva06g01830 1040 PANTHER CALCIUM-BINDING EF HAND FAMILY PROTEIN 959 1040 - -
Bva06g01830 1040 MobiDBLite consensus disorder prediction 263 301 - -
Bva06g01830 1040 MobiDBLite consensus disorder prediction 215 233 - -
Bva06g01830 1040 SUPERFAMILY EF-hand 353 448 IPR011992 -
Bva06g01830 1040 MobiDBLite consensus disorder prediction 531 552 - -
Bva06g01830 1040 MobiDBLite consensus disorder prediction 794 808 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g01830 Bva-Chr6 12590649 12599683 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g01830 1 1040 EF-hand Containing Proteins AT1G20760 53.028 0.0 943
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g01830 K12472 - gmx:100818930 1446.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g01830 06 12590649 12599683 Bva06g01830 06 12590649 12599683 ECH