Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g01825 ATGAGGTTTGATCTGTTTCTCTTTACGCTGGCCATTCTCTCCTCCCCAGTGCTCTCCGATCTCGTCCTCCCCAAGGTTGAGCGTCGTATTGATTTGACATCACAAGTTGTGCGCATCACTACATCACTAAAGGTGGAGAATACGGGATCTGATCTGGTGTCCGAGGTATTGTTAACCTTCCCAGATCGTCAGGCGAATAACTTGGCATACTCGACTGCAACACTATATGAAGGGAAAGGGAAAGCGAAAGCATCTGCTGGTAGTTTACCTGTTGAGCTTGTGCACCCTAAAGATATGCCTCCATCCTTGACAGTTTATTCAGTATCTTTACCAAAGGCGCTTGGGAAGGGAGAGGGTTTGATGTTGGATGTCTTGGCTGTTTTTACCCATGCATTGCAACCGTTTCCAGAGAAAATTACTCAGGCTGATATCCAGCTTGTACTGTTTCAAGAAAGTGCGCACTATCTTTCTCCTTATGCAGTCAAAGCCCAATCACTCACCGTTAAGTTGCCTGATGCAAGAATAGAATCTTATACAAGACTCGAAAATACAAAAGTTCATGGttctgaaataaaatatggtcCTTATGAGAATCTTCCTCCATTCTCATACTCACCAGTAGTTATTCACTTCGAGAGTAACCAACCTTTTGCTGTTGCTAAAGAGTTGGTGCGGGAGATTGAGATTTCCCATTGGGGCAATGTACAGGTGACAGAGCATTACAATCTTGTTCATGATGGCGCTCAGAGCAAGGGAGAATTTTCTAGGCTTGACTATCAGGCTAGACCATATGTAAGAGGTGCATCGGCCTTTAGGCGTCTTGTTGCAAAATTGCCACCAAGGGCTCATTCTGTATATTACAGGGATGAGATTGGCAACATCTCTACTTCTAGTTTATGGGGTGATTCGAAAAAGATGGAAATGGAGATTGAACCTAGATATCCAATGTTCGGGGGCTGGAAAACTGCTTTTACCATTGGATATGGCTTGCCTCTTCGGGACTtcttatttgaattgaatggagAACGCTTcctaaatatttcttttggttcCCCAGTGAATGAGTTGGTCATTGACGCCCTTTTTGTGAAGGTTGTTTTGCCAGAGGGTTCAAGAGAGATTTCTGTATCTGTCCCATTTCCTGTGAAACAACGACAGGAGACCAAGTTCTCCCACTTGGATGTTGTTGGTAGGCCTGTTGTTGTGCTGGAGAAGAACAATGTTGTGCCTGAGCATAATGAACATTTTCAGGTTTATTACAAGTTCAGCAGTCTTTCTATGCTCATGGAGCCCCTGATGTTGATTtctggatttttctttctatttgttGCTTGCATTGCGTACATGCATGCAGATTTGTCAATCTCAAAGTCTTCTGCATCTTATTTGTCAAAACTCCAGTGGGAAGAGGTACAAGCAACCGTTCAGCAGGTCCATAATATCATCAGCCGTTGCCTAGCAATGCATGATAAGCTAGAAGCATCTTTACGTGATCTTTCCAGGACAGGAGATATTCAAGCCTGTAAAGCAACTCGAAAATCAGTTGATAGCTTGTTGAAAGAGCTCTCTAAAGAGCTGAAGCCATTGATAGCATTCTTGCAATCTTCTTTCCAAGCAGCTCAAATATTTCCGAAGGTGGAGGAGCTTATTGCGAAGGAGAGAGATTTGCAAGAGAGGCTAATGGCAAAACACTCGACAGTTGTGGACTGCTACGAGAAGAAGTTAGGGGGGCGAGAAATTGAGAATCGGATTGCTTCACATCATCAGAAAATTTCCATTTTGAGGCAGGAGATTGATGATCTGATGGAGTTTATTGACgagatatg 1826 0.4173 MRFDLFLFTLAILSSPVLSDLVLPKVERRIDLTSQVVRITTSLKVENTGSDLVSEVLLTFPDRQANNLAYSTATLYEGKGKAKASAGSLPVELVHPKDMPPSLTVYSVSLPKALGKGEGLMLDVLAVFTHALQPFPEKITQADIQLVLFQESAHYLSPYAVKAQSLTVKLPDARIESYTRLENTKVHGSEIKYGPYENLPPFSYSPVVIHFESNQPFAVAKELVREIEISHWGNVQVTEHYNLVHDGAQSKGEFSRLDYQARPYVRGASAFRRLVAKLPPRAHSVYYRDEIGNISTSSLWGDSKKMEMEIEPRYPMFGGWKTAFTIGYGLPLRDFLFELNGERFLNISFGSPVNELVIDALFVKVVLPEGSREISVSVPFPVKQRQETKFSHLDVVGRPVVVLEKNNVVPEHNEHFQVYYKFSSLSMLMEPLMLISGFFFLFVACIAYMHADLSISKSSASYLSKLQWEEVQATVQQVHNIISRCLAMHDKLEASLRDLSRTGDIQACKATRKSVDSLLKELSKELKPLIAFLQSSFQAAQIFPKVEELIAKERDLQERLMAKHSTVVDCYEKKLGGREIENRIASHHQKISILRQEIDDLMEFIDEI 608
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g01825 608 Pfam Ribophorin I 24 448 IPR007676 GO:0006486|GO:0016021
Bva06g01825 608 PANTHER DOLICHYL-DIPHOSPHOOLIGOSACCHARIDE--PROTEIN GLYCOSYLTRANSFERASE SUBUNIT 1 6 586 - -
Bva06g01825 608 PANTHER RIBOPHORIN I 6 586 IPR007676 GO:0006486|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g01825 Bva-Chr6 12570245 12574456 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g01825 15 546 Miscellaneous Gene Families AT1G76400 68.797 0.0 772
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g01825 K12666 - gmx:100817203 977.622
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g01825 06 12570245 12574456 Bva06g01825 06 12570245 12574456 ECH