Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g01821 ATGGGTTTGTCCAAAACACTTGTGGTCCTGGCCTGCTCCATTGTTTCCCTATGTGTGTTTTCAGCTTTTGGGCGTGATTTATCCATCGTTGGGTATTCGCCGGAGGACTTGAAGTCCGCGGATAAGCTGATCGACCTGTTTGAATCATGGATGTCCAAACATGGCAAGATTTATCAAAGCATTGAGGAGAAGTTACGTAGGTTCGACATTTTCAAGGATAACCTCATGCACATTGACGAGACTAACAGGAAAGCCAAAAACTACTGGCTTGGCCTCAATGAATTTGCTGATTTGAGCCACCAAGAGTTCAAGAACATGTaccttggtctcaaacctcAATCGGTATTGGTGTCTAAAAGGCCGAGGCCGACATCAGAGGAGTTCGATCGTGTTGTCGATTTGCCCAAGTCTGTGGATTGGAGAAAGAAAGGCGCTGTTACTCCTGTCAAGAACCAAGGCTCGTGCGGTAGTTGTTGGGCATTTTCAACAGTGGCCGCGGTGGAGGGAATAAACCAGATAGTGACAGGAAATTTAACGTCTCTGTCTGAGCAAGAGTTGATTGATTGCGACACGAGTTACAATAATGGCTGCAACGGGGGTCTCATGGACTATGCCTTTGAATATATAGTCGCTAACGGTGGGATTCATAAGGAGGAAGACTATCCTTACATGATGGGGGAAGGCACCTGTGAGATGAGaaagGACGAATCTGAGGTGGTGACCATTAGTGGTTACCATGATGTGCCAGCCAACAATGAGCCGAGCCTGTTGAAGGCACTTAGCAACCAACCCCTCAGTGTGGCCATAGAGGCTTCAGGCAGAGATTTCCAGTTCTACAGCGGGggtgTCTTCGATGGTCATTGCGGAAGTGAACTTGATCACGGCGTGGCTGCTGTTGGATATGGGACATCCAAAGGATTGGATTATATCATAGTCAAAAATTCATGGGGCCCAAAGTGGGGTGAGAAAGGCTACATAAGGATGAGAAGGAACATTAGTGGCAAGCCCGAAGGTCTCTGTGGAATTAACAAAACGGCTTCCTATCccaccaaaaagaaatg 1061 0.4543 MGLSKTLVVLACSIVSLCVFSAFGRDLSIVGYSPEDLKSADKLIDLFESWMSKHGKIYQSIEEKLRRFDIFKDNLMHIDETNRKAKNYWLGLNEFADLSHQEFKNMYLGLKPQSVLVSKRPRPTSEEFDRVVDLPKSVDWRKKGAVTPVKNQGSCGSCWAFSTVAAVEGINQIVTGNLTSLSEQELIDCDTSYNNGCNGGLMDYAFEYIVANGGIHKEEDYPYMMGEGTCEMRKDESEVVTISGYHDVPANNEPSLLKALSNQPLSVAIEASGRDFQFYSGGVFDGHCGSELDHGVAAVGYGTSKGLDYIIVKNSWGPKWGEKGYIRMRRNISGKPEGLCGINKTASYPTKKK 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g01821 353 PANTHER CYSTEINE PROTEASE XCP1-LIKE 24 351 - -
Bva06g01821 353 Pfam Papain family cysteine protease 134 350 IPR000668 GO:0006508|GO:0008234
Bva06g01821 353 SUPERFAMILY Cysteine proteinases 42 350 IPR038765 -
Bva06g01821 353 ProSitePatterns Eukaryotic thiol (cysteine) proteases histidine active site. 292 302 IPR025660 -
Bva06g01821 353 PRINTS Papain cysteine protease (C1) family signature 309 315 IPR000668 GO:0006508|GO:0008234
Bva06g01821 353 PRINTS Papain cysteine protease (C1) family signature 152 167 IPR000668 GO:0006508|GO:0008234
Bva06g01821 353 PRINTS Papain cysteine protease (C1) family signature 294 304 IPR000668 GO:0006508|GO:0008234
Bva06g01821 353 SMART Inhibitor_I29_2 47 103 IPR013201 -
Bva06g01821 353 PANTHER CYSTEINE PROTEASE FAMILY C1-RELATED 24 351 - -
Bva06g01821 353 ProSitePatterns Eukaryotic thiol (cysteine) proteases asparagine active site. 309 328 IPR025661 -
Bva06g01821 353 CDD Peptidase_C1A 135 349 IPR039417 -
Bva06g01821 353 Gene3D Cysteine proteinases 26 352 - -
Bva06g01821 353 Pfam Cathepsin propeptide inhibitor domain (I29) 47 103 IPR013201 -
Bva06g01821 353 ProSitePatterns Eukaryotic thiol (cysteine) proteases cysteine active site. 152 163 IPR000169 -
Bva06g01821 353 SMART pept_c1 134 350 IPR000668 GO:0006508|GO:0008234
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g01821 Bva-Chr6 12560288 12561562 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g01821 K16290 - gmx:100788466 578.17
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g01821 06 12560288 12561562 Bva06g01821 06 12560288 12561562 ECH