Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g01808 ATGGAAGAAGTAGCAGAATACCAAGACGAAGTCCTACTTAGACGCTTGCAGGAGTCCTTAAATGCACAGCCAGATAACGCCTCGCTCCATTATGATATGGGTTTGTTTTTGTGggaaaaaaggagagaaaccAAGGAAAAAGCTGCTGAACATTTTGTAATATCCGTTAAATTGAACCCTAACAATGGAGATTGTTTCAAATATTTGGGCCATTATTATCGCGGTGTTTCCATTGATATTCAAAGAGCCATTAAATGTTACCAGAGAGCTGTTGCTCTCAATCCCGATGATTTCGACTCTGGGgaAGCTTTGTGCAATTTGCTTGACgaaggaagaaaggaaagtTTGGAGCTCTCGGTATGCCAAGAAGCTTCCGAAAAGTCACCGAGGGCTTTCTGGGCTTTCCGTAGATTGGGTTATCTGCagGTCCATCGTAAGAAATGGTCTGACGCTGTCCAGAGTCTTCAACATGCCATACGAGGGTATCCAACATGTGCTCATTTGTGGGAAGCTTTGGGCCTTTCTTATCAGAGACTCGGCAGGTTTACTGCAGCTATAAAGTCCTATGGTCGTGCCATTGAATTGGACAACACTATGGTCTTCGCTTTGGTTGAAAGTGGAAATATCTATTTGGCACTTGGATCTTATAAAAAGGGAGTTGAGCATTATCGCCAAGCTCTAGAGATTTTGCCGCAATGTGTGTCTGCACACTATGGGCTTGCTTCAGGGCTGCTTGGTTTGGCAAAATATTGCATTAATCTGGGAGCTTATAAGTGGGGGTCTTCATATTTGGAGGAAGCAGCTGAGGTTGCAAGAGCAAGTACTTATTTTGCTAAGAATATTTCATGTATTTGGAAACTGCATGGTGATATTCAGCTTGCATATGCAAAATGCTATCCTTGGATTGAGGAGAACCAAAAATTGGAATCTGACAAGGAAGCTTTCAATGCTTCTGTCCTTGCTTGGAGGAAGATGTGCTTCTCCGCAGCAACATATGCAAGAATTTCATATCAACGTGCGTTGCACTTGGCCCCGTGGCAAGCTAATATCTATGTTGATATTGCAATAACTTCAGACCTCATTTGCTCATTTAACAGGAATTACAAGAAAGACTCAAATGCATGGCAGCTTTCAGAAAAGATGACTATGGGTGCCTTGTTACTTGAGAGTGACAATTATGAGTTCTGGGTGGCATTGGGATGCTTGTCTCATCATAATGCTCTGAAGCAACATGCCTTAATCAGAGGATTGCAATTGAATGTATCATTAGCTGTTGGTTGGGGATATCTTGGGAAGCTTTATCGAAAAGAGGATGAAATGCTATTGGCAAGGCAATCATTTGATCATGCTAGAAGTATTGATCCTGGCCTTGCACTGCCATGGGCAAGCATGTCAGCTGAGAGTCAACCCGGGGATTCTGCACCAGATGAGGCATTTGAGAGTTGTTTACGAGCTGTGCAGATAATGCCTTTAGCTGAATTCCAAATTGGTCTTGCAAAGCTTGCTTTGCTAACTGGCCATCTATCTTCTTCACAGGTTTATGGAGCTATTCAGCAGGCTGTGCAGCGTTCACCTCAGTATCCTGAATTGCATAATTTGAATGGACTAGTGTGCGAGGCTCGAAAAGATTACCGGTCTGCTGTTGCTTCTTATCGATTAGCACGCCATGCAATTGACACTAGCTTAGGAGATGTTTCAAAGACACAGATCAGGGATGTATCAATCAATTTGGCCAGATCACTTTCTAAGGCAGGGAATGCTGCTGATGCTTTGCAGGaatgtgaaaatttaaagaaagaagGGCTTCTTGATGCAAAGGATTTTCAAGTGTATGCTCTCTCTCTGTGGCAATGTGGTCAAAATGATTTGGCACTTACTGTAGCAAAAAATCTTGGGGCAAGTCTTTCTTATATGGAAAAGGCATCTGCGGCAACATCCATCTGCTTCATCTGTAGATTATTGTACATCATGTGTGGGCTGGATGCAGTGATAACTGCCATTTTGAAAATGCCAAAGGAATTATTTCAGGATTCAAAAGTTTGTTTTGTAATGTCAGCTATTCATGCTCTTGATGAACAAAATCGTCTTGGATTTGTTGTCTCTAGTAGTCGATATATTCTTACATCTAATGAAGAGATTACTGGGATGCACTTTTTAATAGCACTTGGTAAACTGGTAAAAAATGGATCTGAAGATTGCCTTGGAGTTCAGAGTGGGCTTGCTCACCTTAGAAAAGCTCTCCACATGTACCCTAGCAGTGATTTGATGAGGAACATGCTTGGATATCTGTTGCTGTCCAGTAAAGGGTTAAACAGTTGTCATGTAGCAACAAGGTGCTGCAAACAGGATCCTCTTGACCTTTCAGATCAGGAAGGCTTAAAATCAGTCAGTGATATTTGTGGTGCTGGAACAGTTGCTTGCTATGTCATTGGCAATAGCAACCCCAAGTTCACTCTTCCAACTTGTACAAAACAGTTTCCTTGTCATGTTGGAGCTATCAGATACCTACAAAGATGCTTTCATCAGAAACCATGGAATCATAATGCTGGGTACTTGCTTGTGCTTCACAATCTTCAGAGGGCAcgtgaagagagatttcctTATCATCTCTGTGTTATACTTAATCGTCTGATTGTTGTGGCTCTATCAAATGAATTGTATTGTAAAGAAGAAATGCTGTCTCAATATAGACAGTTCCAACTTCTACTCTGTGCTTCTGAGATCAGTTTACAATTTGGGAATCAAGTTGCCTGTATCACCCATGCTAAAAGGGCTTCAGAAATTGTGCTTCCTGATGGTTATCTATTCTTTGCACACCTGTTGCTTTGCCGTGTATATGCCTTGAAAGATGATCGTCTAAGTCTTCAGAAAGAGTATATGAGATGCTTAGAGCTCAAGACAGATTGTTATATTGGTTGGATCTGTCTCAAACTTATGGAATCTCGATACCAACTACAAATTGATTCAAATAACGTGGATTTGAACTTTGCAGCATGTTTAAAAAGGGGGGGAAATTTATGGAATGTGTGGATGGCTGTATATTTATTGGTGAGAGGTTTGATATCTTTGCAGAACTGTGATTTACTCTCAGCAGAAGAGTTCGCAGGACAGGCATGTTTATTGGCGGGTTCTGAGGGCTGCTCTCATCTCTGTCATGGTGCTATATGTATGGAGCTTGGCAGGCAGTACCATGATTCCCACTTTCTGTCACGTGCTGTAAAGAGTCTTACCAAAGTTCATGAATACTCAGTAATTCCCTTACCTCTTGCCTCAATAGTGCTGGCTCAAGCAGAAGGAAGCTTCGGCTCCAAGGAGAAGTGGGACAGAAACCTCCGTCTTGAATGGTCTACTTGGCCACCAGAAATGAAGCCTGCGGAACTCTTCTTTCAAATGCATTTGCTTGCAAGAAATATGGAAGTTGGGTCTAGGACTCCATCTGGCATGGAGTCCTCTCGGAGTCCCCAGAGATGGGTTGTCCGGGCTATTCACATGAACCCTTCCTGTATGAGATATTGGAGAGTTTTACAGAAACTGCTGGAATG 3542 0.4139 MEEVAEYQDEVLLRRLQESLNAQPDNASLHYDMGLFLWEKRRETKEKAAEHFVISVKLNPNNGDCFKYLGHYYRGVSIDIQRAIKCYQRAVALNPDDFDSGEALCNLLDEGRKESLELSVCQEASEKSPRAFWAFRRLGYLQVHRKKWSDAVQSLQHAIRGYPTCAHLWEALGLSYQRLGRFTAAIKSYGRAIELDNTMVFALVESGNIYLALGSYKKGVEHYRQALEILPQCVSAHYGLASGLLGLAKYCINLGAYKWGSSYLEEAAEVARASTYFAKNISCIWKLHGDIQLAYAKCYPWIEENQKLESDKEAFNASVLAWRKMCFSAATYARISYQRALHLAPWQANIYVDIAITSDLICSFNRNYKKDSNAWQLSEKMTMGALLLESDNYEFWVALGCLSHHNALKQHALIRGLQLNVSLAVGWGYLGKLYRKEDEMLLARQSFDHARSIDPGLALPWASMSAESQPGDSAPDEAFESCLRAVQIMPLAEFQIGLAKLALLTGHLSSSQVYGAIQQAVQRSPQYPELHNLNGLVCEARKDYRSAVASYRLARHAIDTSLGDVSKTQIRDVSINLARSLSKAGNAADALQECENLKKEGLLDAKDFQVYALSLWQCGQNDLALTVAKNLGASLSYMEKASAATSICFICRLLYIMCGLDAVITAILKMPKELFQDSKVCFVMSAIHALDEQNRLGFVVSSSRYILTSNEEITGMHFLIALGKLVKNGSEDCLGVQSGLAHLRKALHMYPSSDLMRNMLGYLLLSSKGLNSCHVATRCCKQDPLDLSDQEGLKSVSDICGAGTVACYVIGNSNPKFTLPTCTKQFPCHVGAIRYLQRCFHQKPWNHNAGYLLVLHNLQRAREERFPYHLCVILNRLIVVALSNELYCKEEMLSQYRQFQLLLCASEISLQFGNQVACITHAKRASEIVLPDGYLFFAHLLLCRVYALKDDRLSLQKEYMRCLELKTDCYIGWICLKLMESRYQLQIDSNNVDLNFAACLKRGGNLWNVWMAVYLLVRGLISLQNCDLLSAEEFAGQACLLAGSEGCSHLCHGAICMELGRQYHDSHFLSRAVKSLTKVHEYSVIPLPLASIVLAQAEGSFGSKEKWDRNLRLEWSTWPPEMKPAELFFQMHLLARNMEVGSRTPSGMESSRSPQRWVVRAIHMNPSCMRYWRVLQKLLE 1180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g01808 1180 Pfam Tetratricopeptide repeat 204 231 IPR019734 GO:0005515
Bva06g01808 1180 SUPERFAMILY TPR-like 519 765 IPR011990 GO:0005515
Bva06g01808 1180 ProSiteProfiles TPR repeat profile. 200 233 IPR019734 GO:0005515
Bva06g01808 1180 Gene3D Tetratricopeptide repeat domain 113 294 IPR011990 GO:0005515
Bva06g01808 1180 SMART tpr_5 166 199 IPR019734 GO:0005515
Bva06g01808 1180 SMART tpr_5 132 165 IPR019734 GO:0005515
Bva06g01808 1180 SMART tpr_5 424 457 IPR019734 GO:0005515
Bva06g01808 1180 SMART tpr_5 528 561 IPR019734 GO:0005515
Bva06g01808 1180 SMART tpr_5 1012 1045 IPR019734 GO:0005515
Bva06g01808 1180 SMART tpr_5 200 233 IPR019734 GO:0005515
Bva06g01808 1180 SMART tpr_5 63 97 IPR019734 GO:0005515
Bva06g01808 1180 SMART tpr_5 241 274 IPR019734 GO:0005515
Bva06g01808 1180 SMART tpr_5 27 62 IPR019734 GO:0005515
Bva06g01808 1180 SUPERFAMILY TPR-like 17 236 IPR011990 GO:0005515
Bva06g01808 1180 SUPERFAMILY TPR-like 333 555 IPR011990 GO:0005515
Bva06g01808 1180 Gene3D Tetratricopeptide repeat domain 11 112 IPR011990 GO:0005515
Bva06g01808 1180 PANTHER SUPERKILLER 3 PROTEIN-RELATED 12 866 IPR039226 GO:0006401|GO:0055087
Bva06g01808 1180 Pfam Tetratricopeptide repeat 167 197 IPR013105 -
Bva06g01808 1180 PANTHER TETRATRICOPEPTIDE REPEAT PROTEIN 37 12 866 - -
Bva06g01808 1180 ProSiteProfiles TPR repeat profile. 166 199 IPR019734 GO:0005515
Bva06g01808 1180 Gene3D Tetratricopeptide repeat domain 359 644 IPR011990 GO:0005515
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g01808 47 243 Glycosyltransferase AT3G04240 22.511 1.71e-09 60.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g01808 K12600 - gmx:100779830 1756.11
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g01808 06 12490467 12499820 Bva06g01808 06 12490467 12499820 ECH