Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g01778 ATGGCTGATTCAACTTGTCTTTTGCGATCCTTGTCCAATCCCACTGCCATTTCCCTCGTAGCCAAAGAGCAACCAAATACATGGGGTTTGATGTCATGGgggGATCCCATCTGTGCGAAACTTGGAGAATCAATCTCTTTTGGGAGGTTCATGTCGGAAAGCCTGGCTTGGGAGAAATGGTCAGCATTCTCGCACAATCGCTATGTTGAAGAAGCTGAAAAATTCTCCAGACCAGGTTCCGTTGCTGAAAAGAAAGCTTATTTTGAGGCTCATTACAGGGAAAAGGCAGCTGAGAGATCAGCAGCTTTAATCCAAGAAGCAAATGATTCAGCTAATAGAACTTCTGATTCAGAAGCTCAGGATGGAACTTGCAATAACTCGTCCACTGAGATAAAGTCAAAAGCAGACAGCAATGTGGCTGTTGTTGAACAGCGGGACAATGATGCTGTTAATTGCATTGTTGACTATGCTgatgaaaacaaatataaatctaaTATTGAACAAAATGAGGTAGATATTTCTAGAGTAGAAAGATCAGAGGATGTGCCAGAACCACGTGTTGATATGAATCCTAGTGTGGAAAATTCtagtttagtttataattCTAATCAGTTTGTTAATGTTGAAGTGAATAAGAAGATAGCAATACACAAAGAAGATAGAATGCCTGATCCGGGCCCTACTGGTGAGGAGATTCAGGCTTTGTCAGTCAGGAGAAGAGAAGTAACTTCCTCTCTAAAATTACCATCCAAAACTGGGGCAGCCAAACTTTCATATTCTCTTGCTGAAAGGAAGGCTGCAGTACAAGCAGAGGATAGAATAAACAGTGCTCTAGGAAGTAAGAAGTCTGCTGGAGGCTCATTTGAGAAGAAGAGACTAATTGCGCGGTCACTCCATATGTCAATCAATCTTCCTTCGAGTGTTGGTGTAAAAAGCAAAACAACTTCAGTGTCTGAGCAgaacagaataaaaaaagtcaatccTAATTTACCCAAAATTCCCAAAGGTGCACGCATTGAAGCTTCGTCAAATCCCCAGTCTGAGGGCAAAAGCTTCCTGAAATCTTCAAGCGCAACCAGCATCAATCCACGTCTCTCTACCACATCATTCCCTTTTAAATTGAGAAGTGAAGAAAGAGCAGCAAAACGCAAAGAGTTCTTCCAGAGGCTAGATGAAATTAAATCCCAGGAGGCAGAGAAAGTTCAGGTGCAGGAAAGACGCAAGaagaaaacaaagcatGATCCCAAGAAGCTTCAGCAGAACAGCGGCTCtaaatccaaaccaaatacGAATATAAATGATGGATCTCAGTCGCTAAGTGATGTGATAAGAAAGGTCCTAGTTACACCGCCTCGATCACTAAATCTTGGAAGGAAAGCAAGTCCTCGGAAACTTCGGAAGCCTCCAAACCCAATCACTACCACTACCAATAATATCAAACGTGTCGCGGAGAAAATTAACCAAAGAACGAGGCATTCAATTACTCCACTAGTGAGGAAGATCACACGGGAGAACGCTTCTCCTAATATTCAGCCTTG 1538 0.4044 MADSTCLLRSLSNPTAISLVAKEGDPICAKLGESISFGRFMSESLAWEKWSAFSHNRYVEEAEKFSRPGSVAEKKAYFEAHYREKAAERSAALIQEANDSANRTSDSEAQDGTCNNSSTEIKSKADSNVAVVEQRDNDAVNCIVDYADENKYKSNIEQNEVDISRVERSEDVPEPRVDMNPSVENSSLVYNSNQFVNVEVNKKIAIHKEDRMPDPGPTGEEIQALSVRRREVTSSLKLPSKTGAAKLSYSLAERKAAVQAEDRINSALGSKKSAGGSFEKKRLIARSLHMSINLPSSVGVKSKTTSVSEQNRIKKVNPNLPKIPKGARIEASSNPQSEGKSFLKSSSATSINPRLSTTSFPFKLRSEERAAKRKEFFQRLDEIKSQEAEKVQVQERRKKKTKHDPKKLQQNSGSKSKPNTNINDGSQSLSDVIRKVLVTPPRSLNLGRKASPRKLRKPPNPITTTTNNIKRVAEKINQRTRHSITPLVRKITRENASPNIQP 502
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g01778 502 MobiDBLite consensus disorder prediction 98 125 - -
Bva06g01778 502 MobiDBLite consensus disorder prediction 440 467 - -
Bva06g01778 502 MobiDBLite consensus disorder prediction 388 428 - -
Bva06g01778 502 PANTHER TPX2 (TARGETING PROTEIN FOR XKLP2) PROTEIN FAMILY 329 501 - -
Bva06g01778 502 MobiDBLite consensus disorder prediction 411 428 - -
Bva06g01778 502 Pfam Targeting protein for Xklp2 (TPX2) domain 362 418 IPR027329 -
Bva06g01778 502 PANTHER TPX2 (TARGETING PROTEIN FOR XKLP2) PROTEIN FAMILY 1 311 - -
Bva06g01778 502 MobiDBLite consensus disorder prediction 330 356 - -
Bva06g01778 502 MobiDBLite consensus disorder prediction 479 502 - -
Bva06g01778 502 MobiDBLite consensus disorder prediction 299 315 - -
Bva06g01778 502 PANTHER TPX2 (TARGETING PROTEIN FOR XKLP2) PROTEIN FAMILY-RELATED 1 311 IPR044216 -
Bva06g01778 502 MobiDBLite consensus disorder prediction 299 356 - -
Bva06g01778 502 MobiDBLite consensus disorder prediction 98 127 - -
Bva06g01778 502 PANTHER TPX2 (TARGETING PROTEIN FOR XKLP2) PROTEIN FAMILY-RELATED 329 501 IPR044216 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g01778 Bva-Chr6 12292518 12295910 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g01778 - - qsu:112034213 328.561
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g01778 06 12292518 12295910 Bva06g01778 06 12292518 12295910 ECH