Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g01774 ATGATTGAGTCAGGAGCAATAAACAATTTCAAAAACTTTCCAGGGAAGTTTTTTGTGGCTGATCTTTGGTCTGATGTGGATTTTCGCGTCCATGTTTCATTCTTCTCTGACCAGTGGATGAGATTGGAGGCTTGTGAACTGGTTCCGATCCATGGTTGGAGAAGTGGGTTGTCTTCTGGGGAACAAAGACGTGTCCTGTCGAAGGTGGAAGTGGAAGCCATGCAGTTTATTCAAATGTTTCATCCACCTCTCGAGGCAGTGATACAGGGAGCAAATGGGAATTCTGTGTCTCTCTCTTACGAAGCATTACCTGCATTCAGAGATGTTCCCAACTCTGAGAAGCAGAGCTTGTTTATAAAGAAGCTGAAGATGTGCAGTGTTGTGTTTGACTTCACTGACCCAACGAAGCAcctcaaagaaaaagaaattaagcgaCAAACGTTGGTAGAATTGGTGGATCACGTGACTTCTGCTAATAGtaaatttacagaaaatgtAATACAAGAAGTTGTAAACATGGTCtctgtaaatatatttaggaCTCTTAGTCCTCAACCACGTGAGAGTAAACATGTTGAAGCCCTTGATGTGGATGAGGAAGAGCCTTCAATGGATCCTGCATGGCCTCACTTGCAAATTGTGTATGAGCTTTTCCTAAGATTGGTGGCATCCCCTGAACTGGATGCAAAGTTGGCTAAAAGATACATTGATCAATCTTTCATTTTGAAGCTTCTGGATTTGTTTGATTCTGAAGATCCTAGAGAACGGGAATGCTTAAAAATGATTCTGCACCGCATCTATGGCAAATTTATGGCACATCGCCCTTTCTTCAGGAAATCCATCaacaatatcttttatcattttatttttgagacaGAGAAGCATAATGGGATTGCTGAATTTCTAGAAATTCTGGGCAGCATCATTAATGGTTTTGCACTACCATTGAAGGAAGAGCACAAACTATTCCTTGTTCGTGTACTTATTCCCCTACACAAACCAAAATGCTTAGCAATGTACCATCAGCAGTTATCTTATTGCATTACCCAATTTGTGGAGAAAGATTGCAAACTTGCTGATACCATTATCAGGGGATTGTTGAAGTACTGGCCGTTAACTAATAGTTCAAAGGAAGTTATGTTCCTAAGTGAGTTAGATGAAGTCTTAGAAGCAACTCAATCTCCAGAGTTCCAGCGTTGTATGGTGCCATTGTTTGGCCGAATTGCTCATTGTCTAAATAGTCCACATTTCCAGGTGGCTGAAAGAGCTTTGTTCTTATGGAACAATGATCATATTGAGAAcctaatcaaacaaaattgcaAGGTTATACTGCCTATCATCTTCCCCGCATTGGAGAAAAATGTTAGAAGTCATTGGAATCAGGCTGTCCGTAGTCTGACCTTGAATGCACGCAAGATTTTCTATGATGTTGATCCTGATCTCCTCAAGGAATGCCTACAGAAGTTTGAGGAAGATGaatcaaaggaagaagaaattacaGCTAAGCGTGAAGCCACATGGAAACGCTTGGAGGAACTTGCTGCAAGTAGCTA 1553 0.3851 MIESGAINNFKNFPGKFFVADLWSDVDFRVHVSFFSDQWMRLEACELVPIHGWRSGLSSGEQRRVLSKVEVEAMQFIQMFHPPLEAVIQGANGNSVSLSYEALPAFRDVPNSEKQSLFIKKLKMCSVVFDFTDPTKHLKEKEIKRQTLVELVDHVTSANSKFTENVIQEVVNMVSVNIFRTLSPQPRESKHVEALDVDEEEPSMDPAWPHLQIVYELFLRLVASPELDAKLAKRYIDQSFILKLLDLFDSEDPRERECLKMILHRIYGKFMAHRPFFRKSINNIFYHFIFETEKHNGIAEFLEILGSIINGFALPLKEEHKLFLVRVLIPLHKPKCLAMYHQQLSYCITQFVEKDCKLADTIIRGLLKYWPLTNSSKEVMFLSELDEVLEATQSPEFQRCMVPLFGRIAHCLNSPHFQVAERALFLWNNDHIENLIKQNCKVILPIIFPALEKNVRSHWNQAVRSLTLNARKIFYDVDPDLLKECLQKFEEDESKEEEITAKREATWKRLEELAASS 517
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g01774 517 PANTHER SERINE/THREONINE PROTEIN PHOSPHATASE 2A REGULATORY SUBUNIT 89 515 - -
Bva06g01774 517 Pfam Protein phosphatase 2A regulatory B subunit (B56 family) 103 514 IPR002554 GO:0000159|GO:0007165|GO:0019888
Bva06g01774 517 Gene3D - 110 513 IPR011989 -
Bva06g01774 517 SUPERFAMILY ARM repeat 115 496 IPR016024 -
Bva06g01774 517 PIRSF PP2A_B56 62 517 IPR002554 GO:0000159|GO:0007165|GO:0019888
Bva06g01774 517 PANTHER SERINE/THREONINE PROTEIN PHOSPHATASE 2A PP2A REGULATORY SUBUNIT B 89 515 IPR002554 GO:0000159|GO:0007165|GO:0019888
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g01774 Bva-Chr6 12278476 12282455 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g01774 K11584 - gmx:100811438 740.339
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g01774 06 12278476 12282455 Bva06g01774 06 12278476 12282455 ECH