Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g01773 ATGACGGAACGACAAGAAAAGAGTGAGAAGATGGCCAAAACCAAGAGAGATAGGAACCTGCTCGCCTTCACTGGGGCCGCCGCCGTGCTTGCATTGGCCTTGAACCTTACTATCGCTGCCATCAAGTACCGCAAggagaaaaatacaaaaaagaaagATCTTCCCAGCTCCAAGGTGCGTGTTAATTTATCTGCATCCGAGATTCTTAAGTTGTCGGACCGAATCATTGCCAAGTCAAAAGAGGTGCATGATGCAGTCGGATCGGTCTCCCTGGACAAAGTTACATATATGAATGTAATATCACCCCTAGCAGAACTTGAAGCACAACAATTTCCACTGATTCAGACTTGTGTATTTCCAAAGTTGGTTTCCACTCGAGAGGATGTGCGCAAAGCAAGTGCAGAAGCAGAGCGAAGAATTGATGCTCATCTTAACCTGTACAGCAAGCGTGAAGATGTATACCTTGTTGTCAAAGCATTTGCAGCAAGCGGTGAATGGAAGAGTGTTGAAGCTAAACGCTTTGTTCAGAGCTTGATGAGAGAATTTGAGCGAAATGGATTGAACCTCACTGTCACCAAGAGAGAAGAGTTGCTGCGTCTGAGGGCTGAGATTGATGAGTTAAGCTTAagatatattcaaaatttgaatgatgataacacttttcttctcttcaatgAAGGAGAGTTAGCTGGCTTGCCCCCAGAGCTTCTCAAgGGTTTTGACAAATCTGAAGATGGAAAATTGAAGATCTCCTTGAAAAGTCATCACACTGCAGCTGTACTTGAATTTTGCAAGGTAGGAAGTACAAGACAGATGGTAGCAGTTGCATATGGCAAGAGATGTGCTGAAGTCAATCTTTCACTTTTAGGAAATTTGGTGCAACTGCGTCATAAGTATGCTCGTTTGCTTGGCTATTCCAACTACGCAGAATATACGGTTGATCTTAGGATGGCAAAAACACCTACAAAGGTGTTTGAGTTCCTAGAGGACATTAACGCTGGTTTAACTGACTTAGCCTTGAAGGAACttgatattttgagaaatttgaagAAGAAAGAGGAAGGCGATATTCCATTTGGAATCGAGGATCTACTGTATTATGTAAAACGGGTTGAAGAGCAGAGTTATGATCTGGATTTTGGTGCACTCAAGCAATACTTTCCAATTACTTTAGTTCTATCTGGCATCTTCAAAATTATCCAAGATCTTTTTGGTTTACgttttgaagaaattgaaggtGCTGAGGTCTGGCATTGTGATGTTCGTGCTTTTTCCGTACTTGACTTGGCTTCTGGTGAACTGTTGGGTTATTGCTACCTTGATTTGTACTCAAGGGAGGGAAAATATGGACAAACATGTGTGGTGGCTCTCCAGAACCATGCGTTAACAATCAGCGGCGCACATCAGATACCAGTTGCATTACTGATATCTCAGTGTCAAAAGGATGTTGGCAATAATTCTGCATTATTGCGATTTTCTGAAGTAGTCAGTCTTTTCCATGAGTTCGGCCATGTGGTTCAACAAATTTGCAACCGTGCATCGTTTTCTAGGTTTTCAGGGTTACGGGTTGATCCTGACTTTGTGGAAATCCCTGCTCAGGTGCTAGAAAACTGGTGCTACGAAAGCTACACATTGAAGTTGATTTCTGGGTTTCATCAGGACATTACAAGGCCCATAAAGGATGACATAtgtaaatcaattaagaaatgGAGGAATTCCTTTTCTGCACTTAAACTGAAGCAAGAAATTCTCTActGTCTTTTTGACCAAATCATACATTCTGCTGATAATGTAGACATTCTCGAGTTATTCAAGCACCTTCATCCTAAGgTGATGTTAGGCTTGCCATTGTTGAAAGGAAGTAATCCAGCATCATGTTTTCCTTCCAGTGTTATTGGTTATGAGGCTGCCTGCTACAGTCGTATTTGGAGTGAGGTTTTTGCTGCTGATATATTTGCCTCAAAGTTCTACAGTAACTTTTTAAACCAGTATGTTGGCATGCAATTCAGGAACAAGGTATTGGCCCCAGGAGGCTCGAAGGATTCCGTTGAAATGTTATCAGATTTTCTAGGAAGAGAACCGTCAATTCGAGCGTATATTGATGGCAAAGCCGAATATGTCTTGTA 2126 0.3989 MTERQEKSEKMAKTKRDRNLLAFTGAAAVLALALNLTIAAIKYRKEKNTKKKDLPSSKVRVNLSASEILKLSDRIIAKSKEVHDAVGSVSLDKVTYMNVISPLAELEAQQFPLIQTCVFPKLVSTREDVRKASAEAERRIDAHLNLKREDVYLVVKAFAASGEWKSVEAKRFVQSLMREFERNGLNLTVTKREELLRLRAEIDELSLRYIQNLNDDNTFLLFNEGELAGLPPELLKGFDKSEDGKLKISLKSHHTAAVLEFCKVGSTRQMVAVAYGKRCAEVNLSLLGNLVQLRHKYARLLGYSNYAEYTVDLRMAKTPTKVFEFLEDINAGLTDLALKELDILRNLKKKEEGDIPFGIEDLLYYVKRVEEQSYDLDFGALKQYFPITLVLSGIFKIIQDLFGLRFEEIEGAEVWHCDVRAFSVLDLASGELLGYCYLDLYSREGKYGQTCVVALQNHALTISGAHQIPVALLISQCQKDVGNNSALLRFSEVVSLFHEFGHVVQQICNRASFSRFSGLRVDPDFVEIPAQVLENWCYESYTLKLISGFHQDITRPIKDDICKSIKKWRNSFSALKLKQEILYCLFDQIIHSADNVDILELFKHLHPKVMLGLPLLKGSNPASCFPSSVIGYEAACYSRIWSEVFAADIFASKFYSNFLNQYVGMQFRNKVLAPGGSKDSVEMLSDFLGREPSIRAYIDGKAEYVL 706
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g01773 706 Gene3D Neurolysin, domain 3 192 698 IPR024077 -
Bva06g01773 706 Gene3D Endopeptidase. Chain P; domain 1 37 182 IPR024080 -
Bva06g01773 706 PANTHER PROTEASE M3 THIMET OLIGOPEPTIDASE-RELATED 47 703 IPR045090 GO:0004222|GO:0006508
Bva06g01773 706 Pfam Peptidase family M3 262 700 IPR001567 GO:0004222|GO:0006508
Bva06g01773 706 Gene3D Collagenase (Catalytic Domain) 386 536 IPR024079 GO:0008237
Bva06g01773 706 PANTHER SACCHAROLYSIN 47 703 - -
Bva06g01773 706 SUPERFAMILY Metalloproteases ("zincins"), catalytic domain 60 699 - -
Bva06g01773 706 CDD M3A_TOP 69 699 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g01773 Bva-Chr6 12269047 12277875 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g01773 K01392 - gmx:100793518 1061.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g01773 06 12269047 12277875 Bva06g01773 06 12269047 12277875 ECH