Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g01772 ATGGCTCCGAAGCCGAAGGATAAACCAAAAGCCGCCTCGTCGCCGCCTCTCGTCGAAGATCTCTTTACTGCACTCAACAGGCACATACAGCGGTCCGACTTCGAACATGCTGTTAAAGTTGCAGATCAAATCCTGTCCATTTCGCCTGGCGATGAGGACGCGCTTCGCTGCAAGGTCGTGGCATTGATCAAAGCTGATAGCATCGACGATGCACTATCAACGATTCAAGCTTCCCAGACGCCGCCGGCTGATTTCAATTTCTGTAAAGCGTACTGCTTATACAGACAAAACAAGTTAGATGAAGCTTTGGAGTCTTTAAAAAGCCAAGAGAAAAGATCTGCAACCATGCTGCTGGAATCTCAGATTTTGTATCGTCTAGGGAAAATGGATGCTTGTATGGATATTTACAAGAAGCTCCCAAAATCTGACATTGAAtcattagaaataaattatgttgcTGGCCTAATCATGGCTGGGAGGGCATCTGAAGTGCAAGGGATGATGGACTCTCTTAGGGTAAAAGCAACCAGCAGCTTTGAGTTGGCATACAACACTGCTTGTTCTTTAATTGAAAGGAAGAAGTACGCAGATGCTGAAGAACTCTTGCTGTCAGCCCGAAGGATTGGTCAAGAGACCCTCATGGAAGATAACTTGCCTGATGATGAGATAGAACTTGAGTTGTCTCCCATAGCTGTACAATTAGCCTATGTCCAGCAGCTTCTTGGGCGTACAAAAGATGCCATTGAAGCTTATACAGACATCATTAAACGAGATCTGGCAGATGAATCATCAATTGCGGTGGCAATGAACAATCTGTTTGCGTTAAGAGGTCCAAAGGATGTTCCTGATAGCCTAAGGAAGCTTGATCGTCTAAAAGCGAAAGACACACAGAGCTTTCAGCTTGCTCATGGACTGGATGCGAAACTTTCAGCAAGACAGAGGGAATCAATATATGCAAATCGTGTTCTTTTGCTTCTCTATGCCAATAGAATGGATCAGGCCCGAGAACTTGTTTCCGCTCTGCTGGACATGTTTCCTGACAGTGAGATGCCAATACTGCTGCAAGCTGCAGTGCTGGTGAGAGAGAACAAAGCTGGAAAAGCTGAGGAAGTTCTAGCACAGTTTGCTGACAAATTTCCTCAAAAGTCCAAGTTTTTATACTTATCCAGGGCTCAGGTGGCTGCTGCTGCCGGTCACCCTCATATTGCAGCAGATTCTCTGGCTAAGATATCAGATATCCAGCACAGGCCTGCCACTGTTGCCACACTTGTGTCTCTAAAAGAGCGTGCTGGTGACATTGATGGTGCAGCTGCTGTGCTTGACACTGCAATCAAATGGTGGTCTAATGCCATGACCGAGGACAACAAGCTTAATGTCATAATGCAAGAGGCCGCTTCCTTCCAGCTCAGGCATGGCAGGGAAGGGGATGCTGCGCACCTATATGAGGAGCTTGTGAAAAGCCAAGGAAGTGTAGAAGCGTTAGTTGGGTTGGTAACGACAGTTGCCCGTGTGGATGTTGATAAGGCAGAACTATATGAAAAGCAACTAAAGCCGTTACCTGGTTTGAAGGGGATTGATGTGGATAGTTTGGAGCGGACTTCTGGCGTGAAACATGTTGAGGCTTCTTCTTATGTTGGGGTTACTGAAACATATGAAGAAGGGAAGAATAAGACAAAagccaagaaaaagagaaagagaaaaccaaGGTACCCTAAAGGGTTTGACCCTGCAAACCCAGGTCCTCCCCCAGATCCAGAGAGGTGGCTTCCCAGGCGGGAGAGATCCAGTTATAGGCCCAAGAGAAGGGACAAGAGAGCTGCTCAAGTGAGAGGCTCACAGGGTGCAGTAGTTAGAGAAAAACACGACTCTGGTGCTACTTCCAACTATTCAAATCCAAAAGCAAACCAGGTTGCCACCAAAGGAGCTACGCAGAATGCAGTTGCTGAGCAAGCCAAGCCTTCTTCGTCAAAGTCAAGGAAGAAATCCAGGAATTA 1994 0.4574 MAPKPKDKPKAASSPPLVEDLFTALNRHIQRSDFEHAVKVADQILSISPGDEDALRCKVVALIKADSIDDALSTIQASQTPPADFNFCKAYCLYRQNKLDEALESLKSQEKRSATMLLESQILYRLGKMDACMDIYKKLPKSDIESLEINYVAGLIMAGRASEVQGMMDSLRVKATSSFELAYNTACSLIERKKYADAEELLLSARRIGQETLMEDNLPDDEIELELSPIAVQLAYVQQLLGRTKDAIEAYTDIIKRDLADESSIAVAMNNLFALRGPKDVPDSLRKLDRLKAKDTQSFQLAHGLDAKLSARQRESIYANRVLLLLYANRMDQARELVSALLDMFPDSEMPILLQAAVLVRENKAGKAEEVLAQFADKFPQKSKFLYLSRAQVAAAAGHPHIAADSLAKISDIQHRPATVATLVSLKERAGDIDGAAAVLDTAIKWWSNAMTEDNKLNVIMQEAASFQLRHGREGDAAHLYEELVKSQGSVEALVGLVTTVARVDVDKAELYEKQLKPLPGLKGIDVDSLERTSGVKHVEASSYVGVTETYEEGKNKTKAKKKRKRKPRYPKGFDPANPGPPPDPERWLPRRERSSYRPKRRDKRAAQVRGSQGAVVREKHDSGATSNYSNPKANQVATKGATQNAVAEQAKPSSSKSRKKSRN 664
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g01772 664 Pfam Putative TPR-like repeat 55 151 IPR031545 -
Bva06g01772 664 MobiDBLite consensus disorder prediction 551 664 - -
Bva06g01772 664 PIRSF SRP72 10 664 IPR026270 GO:0006614
Bva06g01772 664 SUPERFAMILY TPR-like 15 378 IPR011990 GO:0005515
Bva06g01772 664 Gene3D Tetratricopeptide repeat domain 174 562 IPR011990 GO:0005515
Bva06g01772 664 Pfam SRP72 RNA-binding domain 551 599 IPR013699 GO:0006614|GO:0008312|GO:0048500
Bva06g01772 664 MobiDBLite consensus disorder prediction 623 653 - -
Bva06g01772 664 Gene3D Tetratricopeptide repeat domain 17 158 IPR011990 GO:0005515
Bva06g01772 664 PANTHER SIGNAL RECOGNITION PARTICLE 72 9 662 IPR026270 GO:0006614
Bva06g01772 664 SUPERFAMILY TPR-like 120 271 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g01772 Bva-Chr6 12262547 12267669 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g01772 K03108 - qsu:112015587 972.615
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g01772 06 12262547 12267669 Bva06g01772 06 12262547 12267669 ECH