Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g01766 ATGCCTCCTTCTTACTTCCCTCTTAGCTGGGAGAGCACCGGAGACCAATGGTGGTATGCATCTCCTATTGATTGGGCGGCTGCCAATGGTCTCTACGATCTGGTTGCAGAGCTTCTCTATCTTGACACCAATCTCCTTATTAAACTCACTTCCCTTCGTCGAATTCGCCGCCTTGAGACTGTATGGGACGACGAAGCCCAGTTTGATGATGTCGCAAAATGTCGCTCCCAGGTTGCGAGGAATCTTGTGCATGAGTGCGAATCGGAGAGAGGGCACAACTCTCTCATTCGAGCTGGCTATGGTGGCTGGCTTCTCTACACTGCTGCCTCTGCCGGAGATATGGATTTTGTTCAGGAATTGTTAGAGAGAGACCCTCTTCTCGTGTTTGGAGAAGGAGAGTACGGAGTCACTGACATATTCTATGCTGCAGCCAGGAGCAAGAACTGTGAGGTCTTCAGACTCTTGCTTGATTTTGCCCTCTTGCCTAAAGATTTTCGTAACACTGGAACAGAATTAGATCAAAGTGCTGGGATTTTCAAGAGGGACATGATGAACAGGGCCATTCATGCTGCGGCCAGAGGAGGGAATTGGGAGATATTGAAGGAGCTTCTCATTATTGGAAATGCTTCTGATGTTTTAGCATATAGAGATGCTCTGGGATCCACAGTCTTTCATACAGCAGCTGCCAGAGGGCAAGTTGAGGTGGTGAGAAATCTAATAGCATCGTCTGACATGATCAGCTCAACAGATTCTCAAGGGAACACAGCACTCCATTTGGCTTGTTACTGGGGATACTTGGCCGTGGTAGAGATTCTGATTGCTGCATCTCCCTCATTGGCACTGCTAACCAATTACTACGGAGACACTTTTCTTCATATGGCAGTGGCTGGTTTCAGAAGCCCTGGTTTTCGTAGACTAGACAAACATATTGAGCTCGTGAAGCAGTTGGTAAGTGGAAAAATCGCGAACATGCAGGACATTATCAATGTCAGGAACAATGATGGTAGAACAGCTCTTCACGTAGCTGTGATTGATAACTTGCAATGTGATGTAGTGGAGTTATTGATGTCTGTGCCATCAATTGATTTGAATATTGGCGATGTCGATGAGATGACCCCATTGGATCTTCTGAAGCGGAGACCGCGATCAGCCACTCGTGAAATTTTAATCAAGCAGTTAATTACGGCGGGAGGGATCTCCAACCTTGAGGATTCTAAAGCCCTTGTAGTTGTATCTGTATCCCTATCCCATCCGAAAAGCCATGGCATCGGAAGCAGTCCCGGAACCTGTTTTGGAATATCAGATGCAGAGATATTCTTGTACACAGGCATTGCCATTGAGGATGCAAGTGCTGTAGAATCCAATTCATGCTCAGGCGAACTGTGCAATTCCCCATACAAGACCAAGTCTGGTTCTGCTGCAACGCGCTTAAAATTTCTCCTCCGTTGgccaaggaagaaagagagaaaagccAAGTTGGACTTGGGAGACGAAGATTCCGTGGATTCTTCTGGCTCAAGTAAAATCTCGCTAGACTTTCCAATTCCATTAAGACAGAGATACTCTTCGCCGGCAAACAGTAAAACGACACCGTCCATCGCGACCAAACAGAAATTTGCTGCAGGTCTTATGCAAGGCGTAATTCAGGTAAAGCCACATTTGGCTCTTCCTGCACCTACGAATCCTTTTCTGAAAACATCGGTGGCTTCACTTTTTTCAATTGATAAGCAAAAAGGTGTTGATATTGTGGGACCCTTGTGCTCTAATCAATCAAGCAGTGCTTCTTTCAATAAGAAATTGATGAATcggtatttttcttttggagcaCAAGGCCTGGCCGTggaagattcaaggagctgcacAGGTTCAAGTCAGAGTTATGAACGTTTCAGTTCTTTAGTTGCATA 1907 0.4431 MPPSYFPLSWESTGDQWWYASPIDWAAANGLYDLVAELLYLDTNLLIKLTSLRRIRRLETVWDDEAQFDDVAKCRSQVARNLVHECESERGHNSLIRAGYGGWLLYTAASAGDMDFVQELLERDPLLVFGEGEYGVTDIFYAAARSKNCEVFRLLLDFALLPKDFRNTGTELDQSAGIFKRDMMNRAIHAAARGGNWEILKELLIIGNASDVLAYRDALGSTVFHTAAARGQVEVVRNLIASSDMISSTDSQGNTALHLACYWGYLAVVEILIAASPSLALLTNYYGDTFLHMAVAGFRSPGFRRLDKHIELVKQLVSGKIANMQDIINVRNNDGRTALHVAVIDNLQCDVVELLMSVPSIDLNIGDVDEMTPLDLLKRRPRSATREILIKQLITAGGISNLEDSKALVVVSVSLSHPKSHGIGSSPGTCFGISDAEIFLYTGIAIEDASAVESNSCSGELCNSPYKTKSGSAATRLKFLLRWPRKKERKAKLDLGDEDSVDSSGSSKISLDFPIPLRQRYSSPANSKTTPSIATKQKFAAGLMQGVIQVKPHLALPAPTNPFLKTSVASLFSIDKQKGVDIVGPLCSNQSSSASFNKKLMNRYFSFGAQGLAVEDSRSCTGSSQSYERFSSLVA 635
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g01766 635 PANTHER ANKYRIN REPEAT FAMILY PROTEIN 1 631 - -
Bva06g01766 635 SMART ANK_2a 334 365 IPR002110 GO:0005515
Bva06g01766 635 SMART ANK_2a 252 281 IPR002110 GO:0005515
Bva06g01766 635 SMART ANK_2a 219 248 IPR002110 GO:0005515
Bva06g01766 635 SMART ANK_2a 286 326 IPR002110 GO:0005515
Bva06g01766 635 SMART ANK_2a 18 47 IPR002110 GO:0005515
Bva06g01766 635 SMART ANK_2a 134 164 IPR002110 GO:0005515
Bva06g01766 635 SMART ANK_2a 100 129 IPR002110 GO:0005515
Bva06g01766 635 SMART ANK_2a 183 214 IPR002110 GO:0005515
Bva06g01766 635 SMART ANK_2a 369 404 IPR002110 GO:0005515
Bva06g01766 635 Pfam Ankyrin repeat 334 367 IPR002110 GO:0005515
Bva06g01766 635 Gene3D - 12 412 IPR036770 -
Bva06g01766 635 PANTHER ANKYRIN REPEAT, PH AND SEC7 DOMAIN CONTAINING PROTEIN SECG-RELATED 1 631 - -
Bva06g01766 635 Pfam Ankyrin repeats (3 copies) 188 274 IPR002110 GO:0005515
Bva06g01766 635 ProSiteProfiles Ankyrin repeat profile. 219 251 IPR002110 GO:0005515
Bva06g01766 635 ProSiteProfiles Ankyrin repeat profile. 252 284 IPR002110 GO:0005515
Bva06g01766 635 SUPERFAMILY Ankyrin repeat 105 391 IPR036770 -
Bva06g01766 635 ProSiteProfiles Ankyrin repeat region circular profile. 252 273 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g01766 Bva-Chr6 12238552 12239271 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g01766 105 376 Miscellaneous Gene Families AT2G31820 29.964 1.61e-19 90.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g01766 - - gmx:100782564 785.793
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g01766 06 12238552 12239271 Bva06g01766 06 12238552 12239271 ECH