Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g01765 ATGGCTTCTGTTGCTGGATCAAACTGTGTGGCTTTCAAAACCGCCCGACTGGCAGACAAGTTTGGAGGTTTCGCTGACAGGAAATTTGGTCACCTCCGCCAATGGTCTCCGATTCATGGAGCTAAACTGAGTCAGCTTCCCAATTTTGGTGTTCAGTACAGATCGAAAAGTTCATTCGGCTCCTCTTGTATAAGAGCTCAGGTTGCCACTCTCGAAGAAGCAGGAACTGGAGCTGTCCAGAAAGTGGAAGCTCCTGCTGTTATAGTGACTGGAGCCTCCAGAGGTATTGGCCGAGCCATTGCATTGTCATTGGGTAAAGCAGGTTGCAAGGTCTTGGTTAATTATGCTAGGTCATCCAAGGAGGCAGAGGAGGTTTCTAAGGAGATTGAGGCATTTGGTGGGCAAGCTCTTACATTTGGGGGAGATGTTTCTAGTGAGGCTGACGTGGAGTCAATGATTAAAACTGCAGTTGATGCTTGGGGAACTGTcgatatattagtaaataacgCAGGTATCACTCGGGATGGATTGTTaatgagaatgaaaaaatCTCAATGGCAGGATGTAATTGATTTGAATCTTACCGGTGTTTTTCTTTGCACTCAGGCAGCAGCTAAGAttatgatgaaaaagaaacagGGGAGGATAATCAATATTGCATCAGTTGTTGGTCTTGTTGGCAATGTTGGACAGGCCAATTATAGTGCTGCAAAAGCAGGAGTAATTGGTCTCACAAAAACTGTTGCAAAGGAGTATGCTAGCCGAAACATCAATGTCAATGCAGTTGCCCCAGGGTTTATTGCATCTGACATGACTGCCAAGCTAGGGCAAGATATTgagaaaaagattttggaGACAATCCCCTTAGGGAGATATGGCCGACCGGAGGAAGTTGCTGGACTCGTGGAATTTTTGGCTCTAAATCCGGCTGCCAACTACATCACTGGGCAGGTCTTAACCATTGACGGAGGGATGGTGATGTA 983 0.4374 MASVAGSNCVAFKTARLADKFGGFADRKFGHLRQWSPIHGAKLSQLPNFGVQYRSKSSFGSSCIRAQVATLEEAGTGAVQKVEAPAVIVTGASRGIGRAIALSLGKAGCKVLVNYARSSKEAEEVSKEIEAFGGQALTFGGDVSSEADVESMIKTAVDAWGTVDILVNNAGITRDGLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKQGRIINIASVVGLVGNVGQANYSAAKAGVIGLTKTVAKEYASRNINVNAVAPGFIASDMTAKLGQDIEKKILETIPLGRYGRPEEVAGLVEFLALNPAANYITGQVLTIDGGMVM 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g01765 327 Gene3D - 86 327 - -
Bva06g01765 327 TIGRFAM 3oxo_ACP_reduc: 3-oxoacyl-[acyl-carrier-protein] reductase 87 326 IPR011284 GO:0004316|GO:0006633|GO:0051287
Bva06g01765 327 PRINTS Glucose/ribitol dehydrogenase family signature 86 103 IPR002347 -
Bva06g01765 327 PRINTS Glucose/ribitol dehydrogenase family signature 161 172 IPR002347 -
Bva06g01765 327 PRINTS Glucose/ribitol dehydrogenase family signature 255 272 IPR002347 -
Bva06g01765 327 PRINTS Glucose/ribitol dehydrogenase family signature 208 224 IPR002347 -
Bva06g01765 327 PRINTS Glucose/ribitol dehydrogenase family signature 288 308 IPR002347 -
Bva06g01765 327 PRINTS Glucose/ribitol dehydrogenase family signature 234 253 IPR002347 -
Bva06g01765 327 PANTHER 3-OXOACYL-[ACYL-CARRIER-PROTEIN] REDUCTASE 4 25 327 - -
Bva06g01765 327 CDD BKR_SDR_c 87 326 - -
Bva06g01765 327 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 161 172 IPR002347 -
Bva06g01765 327 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 214 222 IPR002347 -
Bva06g01765 327 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 234 253 IPR002347 -
Bva06g01765 327 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 87 327 IPR036291 -
Bva06g01765 327 SMART This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 85 270 - -
Bva06g01765 327 PANTHER SHORT-CHAIN DEHYDROGENASES/REDUCTASES FAMILY MEMBER 25 327 - -
Bva06g01765 327 Pfam Enoyl-(Acyl carrier protein) reductase 91 325 - -
Bva06g01765 327 ProSitePatterns Short-chain dehydrogenases/reductases family signature. 221 249 IPR020904 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g01765 Bva-Chr6 12232569 12232805 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g01765 2 327 Acyl Lipid Metabolism Gene Families AT1G24360 65.854 1.70e-155 436
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g01765 K00059 - gmx:100809809 525.783
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g01765 06 12232569 12232805 Bva06g01765 06 12232569 12232805 ECH