Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g01747 ATGCCTGGGTTTGTTGCtggaaagaagagaattaCAGAGCCAAATATGTGTTTCTCCAATTTGGTTCAGGAGGACGCACTTACTCGTTCAAAGAGCAATCATCATTTAATTTCTGAGGTTCTAGATAAAGATGAAAACTCCCTTCTGCCGGGCCTGCCGGATGATGTGGCGAAGTATTGCCTTGCACTTGTGCCTCGTTCAAACTTCCCGACTATGGGTCGTGTCTCTAAAAAATGGAGGTCGTTTATTAAAAGCAAAGAATTTATAACTGTACGAAAATTGGCCGGGGTGCTTGAAGAATGGCTTTATATATTAACTTCAGATagtgaaggaaaggaaagccACTGGGAGGTTCTGGATTGTTTGGGTCATAAGCACCGATCTCTTCCACCTATGCCTGGCCCAGGAAAGGCTGGATTTGGGGTGGTGGTTCTTAATGGGAAGCTTCTTGTTATGGCTGGTTATTCCGCGATTGATGGAACTAGCTCTCCCTCGGCCGAGGTTTATCAGTACGATTCTTGCCTCAACAGCTGGAGCAGATTAAAAAACATGAATGTGGCTCGATATGACTTCGCTTGTGCCGAAGTTAATGGCTTGATTTATGCTGTTGGAGGATATGGTAGAGATGGTGACAGTCTCTCCAGTGCCGAGGTGTATGACCCTGATACTGACAAGTGGACACTGATAGAGAGTCTTCGTCGCCCAAGATGGGGTTGCTTTGCCTGTGGATTTGAGGGAAAACTCTATGTCATGGGTGGAAGGTCGAGCTTCACAATTGGAAACTCCAAGTGCGTTGATGTTTATAACCCTGAGAGACACCGCTGGTGCGAGATGAAGAATGGTTGTGTCATGGTCACTGCCCATGCAGTACTAGGAAAGAAGCTTTTCTGTATAGAGTGGAAGAACCAGAGGAAATTAGCCATATTCAATCCTGACGACAATTCATGGAAAATGGTACCACTCCCGCTGACAGGGAGCTCAAGTATTGGTTTTCGATTTGGGATTCTGGATGAAAAGTTGCTGTTATTCTCACTGGTGGAGGAACCTGGATATCGAACTTTGATATATGACCCAAATGCAACCCCAGGGTCGGAGTGGCAGACTTCGGAGATAAAACCATCTGGTTTGTGTTTGTGTTGTGTAACAATCAAGGCGTG 1157 0.4434 MPGFVAGKKRITEPNMCFSNLVQEDALTRSKSNHHLISEVLDKDENSLLPGLPDDVAKYCLALVPRSNFPTMGRVSKKWRSFIKSKEFITVRKLAGVLEEWLYILTSDSEGKESHWEVLDCLGHKHRSLPPMPGPGKAGFGVVVLNGKLLVMAGYSAIDGTSSPSAEVYQYDSCLNSWSRLKNMNVARYDFACAEVNGLIYAVGGYGRDGDSLSSAEVYDPDTDKWTLIESLRRPRWGCFACGFEGKLYVMGGRSSFTIGNSKCVDVYNPERHRWCEMKNGCVMVTAHAVLGKKLFCIEWKNQRKLAIFNPDDNSWKMVPLPLTGSSSIGFRFGILDEKLLLFSLVEEPGYRTLIYDPNATPGSEWQTSEIKPSGLCLCCVTIKA 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g01747 385 PANTHER OS02G0202900 PROTEIN 1 385 IPR045887 -
Bva06g01747 385 Pfam F-box domain 51 88 IPR001810 GO:0005515
Bva06g01747 385 Gene3D - 86 382 IPR015915 GO:0005515
Bva06g01747 385 PANTHER KELCH REPEAT F-BOX PROTEIN 1 385 - -
Bva06g01747 385 SMART kelc_smart 148 198 IPR006652 GO:0005515
Bva06g01747 385 SMART kelc_smart 199 246 IPR006652 GO:0005515
Bva06g01747 385 SMART kelc_smart 247 292 IPR006652 GO:0005515
Bva06g01747 385 SUPERFAMILY F-box domain 46 89 IPR036047 GO:0005515
Bva06g01747 385 SUPERFAMILY Kelch motif 99 344 IPR015915 GO:0005515
Bva06g01747 385 SMART fbox_2 52 92 IPR001810 GO:0005515
Bva06g01747 385 Pfam Kelch motif 187 232 IPR006652 GO:0005515
Bva06g01747 385 Pfam Kelch motif 239 279 IPR006652 GO:0005515
Bva06g01747 385 Pfam Kelch motif 138 185 IPR006652 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g01747 Bva-Chr6 12141501 12145927 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g01747 52 230 Miscellaneous Gene Families AT4G33900 31.282 9.27e-16 76.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g01747 - - gmx:100802912 670.233
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g01747 06 12141501 12145927 Bva06g01747 06 12141501 12145927 ECH