Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g01741 AtgcaaaccaagaaaaaaccCTCCGGGAGAAACACTAGTCAAGAGCGTGCAAATCCAAGGGGTTCAAGAGCACAGAGGAAGGTCCCTGAAAATGGACGAGAAGTGGAAAGGAAAGTCACTGACTTAATTACATCCTCTGTTAGGAAGAAGCCTGTCAGTTCTCTTGGGAAGAAAAGTGGAGAGCCAatttcttcaacaaatttGAGTAATGAGTATGACTTGGTAGATCACGAGACTTGCTCACCTTGTTTGGTACATGATGTGGTTGATGGTGCTTCAGCATATTGTACGGGTTGTAACAAGCAAGCAGGGCATGTTGAGTCTGGAACTATATTTTCTCCTGGGTTTCACTTATCCAAAGGTTCTGGAGGTAGAGCCAATGACAGAGttgattttgtcaaaaattttcAGAGAGAACAAAAAAGATTCTCCCGAGATCAAGATATTGTGTTATCCCAGGAGGATATGGTAGAAGCACAAGTTAGTCAGGAATCATTGGCTGGAATGGAAGtagatttaaataattcttccAACTGCACAAGCACACCAGCCTGTGATGTTCAGATGCTTGCTTTAAGCTCCAAAGACGTGGACAGTTGCAGTTCTGATTTTGATGGAAATGGTATTTCCTTGGAAGTTTCTGCCATCTATCTTGCCATGAAAAACTCAAAGCTGGAATGTATTGACGAACATGGTCAGGATTCAATATCTTCTGATCTATGTCCTGAGGATGatgaatttgttgattttgatgacTTTGACccttatttattcataaagaCCTTACCGGCCTTGTCATCAGTTGTTCCAACTTTTAGACCATTGTTGCTACCTAAACAGACACGGAGTTGCCCACCTACTACTCTTGTCCTGGACTTGGATGAAACTCTGGTGCATTCTAAGCTAGAGCCTTGTGAGGGCGTAGACTTCACCTTTCCTGTTCATCTTGATTTGCAGGAGCATATTGTCTATGTACGCTGTCGCCCTCACCTCAAACATTTCCTAGAGAGAGTTTCTGGTCTTTTTgagattattatatttacagCTAGTCAAAGTATTTACGCTGAGCAGCTCCTAAACGTGCTTGATCCAATGAGGAAGATATTCCGCCATCGTGTTTTCCGTGAATCTTGTGTTTATGTAGAAGGAAACTACCTCAAAGATTTATCAGTTCTGGGTCGTGATTTGTCACGTGTTATAATAATTGACAACTCTCCGCAGGCATTTGGTTTTCAGGTGGATAATGGAATACCCATTGAGAGTTGGTTTAATGATTGCTCCGACCGAGAATTACTTTTATTACTTCCATTCTTGGAGAGCTTGGCTGAAGTTGATGATGTCCGGCCACTAATTGCAAAGAAATTCAACCTTCGGGAGAAAATCGCTGCAGCTGGGCATCCTTCTCTAAATACAAACAAAAGGCATCTCTTAAATAGTTG 1439 0.3919 MQTKKKPSGRNTSQERANPRGSRAQRKVPENGREVERKVTDLITSSVRKKPVSSLGKKSGEPISSTNLSNEYDLVDHETCSPCLVHDVVDGASAYCTGCNKQAGHVESGTIFSPGFHLSKGSGGRANDRVDFVKNFQREQKRFSRDQDIVLSQEDMVEAQVSQESLAGMEVDLNNSSNCTSTPACDVQMLALSSKDVDSCSSDFDGNGISLEVSAIYLAMKNSKLECIDEHGQDSISSDLCPEDDEFVDFDDFDPYLFIKTLPALSSVVPTFRPLLLPKQTRSCPPTTLVLDLDETLVHSKLEPCEGVDFTFPVHLDLQEHIVYVRCRPHLKHFLERVSGLFEIIIFTASQSIYAEQLLNVLDPMRKIFRHRVFRESCVYVEGNYLKDLSVLGRDLSRVIIIDNSPQAFGFQVDNGIPIESWFNDCSDRELLLLLPFLESLAEVDDVRPLIAKKFNLREKIAAAGHPSLNTNKRHLLNS 479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g01741 479 CDD HAD_FCP1-like 288 419 - -
Bva06g01741 479 SMART forpap2 285 429 IPR004274 -
Bva06g01741 479 PANTHER NUCLEAR LIM INTERACTOR-INTERACTING FACTOR-RELATED 1 465 - -
Bva06g01741 479 MobiDBLite consensus disorder prediction 20 44 - -
Bva06g01741 479 MobiDBLite consensus disorder prediction 46 66 - -
Bva06g01741 479 SUPERFAMILY HAD-like 276 452 IPR036412 -
Bva06g01741 479 ProSiteProfiles FCP1 homology domain profile. 282 441 IPR004274 -
Bva06g01741 479 MobiDBLite consensus disorder prediction 1 19 - -
Bva06g01741 479 Pfam NLI interacting factor-like phosphatase 288 448 IPR004274 -
Bva06g01741 479 PANTHER INTERACTING FACTOR, PUTATIVE, EXPRESSED-RELATED 1 465 - -
Bva06g01741 479 Gene3D - 273 456 IPR023214 -
Bva06g01741 479 MobiDBLite consensus disorder prediction 1 66 - -
Bva06g01741 479 TIGRFAM HIF-SF_euk: dullard-like phosphatase domain 287 450 IPR011948 GO:0016791
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g01741 Bva-Chr6 12108742 12113149 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g01741 K17616 K12778 gmx:100804307 646.736
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g01741 06 12108742 12113149 Bva06g01741 06 12108742 12113149 ECH