Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g01732 ATGTCTCAGGTTGACAACAGAAACTCCTCGGCGGCCAAGCGTGCTAGAACTGACGGTAGTCGTAGGGAAGATGATTGGACGTGCCCTAGCTGTGGCAATGTCAATTTCTCTTTCAGGACAACTTGCAATATGCGTAATTGCACTCAACCAAGGCCCGCCGATCATAATTCGAAATCCACTGCGAAGCCTCTACAAGTCCCTCAGGGCTATTCATCCTCAGCTCCTTATATAGGTTCTGGTGCTCCCTCGTCAATGTATCTTGGTGTCCCACCATATGGTTCTTCTCTATTCAATGGGTCATCCATTCCTCCGTATGATGTTCCATTTTCTGGAGGTTCAGCATATCACTATAATTATGGCAGTCGACTTTCTGCTGGCAGTCCTTACAGACCGCTGCATTTATCTGGACCGACACCATACTCAAGTGGATCCATGATGGCAAATGGTGGCATGTATGGGATACCCCCAATGGTGGATCGGTATGGCCTTGGTATGCCTATGGGACCTGGAACAATgGGCCCAAGGCCGGGATTTTTTCCAGATGACAAGTCCCAAAAAAGGACGGCAGATGCAACTCGTGACAATGATTGGACATGTCCAAAATGTGGTAATATCAACTTCTCCTTCAGAACTGTCTGCAACATGAGAAAGTGCAACACTCCAAAGCCTGGATCTCAGGTTTCTAAATCAGACAAAAATTCTAAGCAAAAGATGCCAGAGGGGAGTTGGAAGTGCGAAAAAtgtaataacattaatttcccATTCAGAACCAAGTGCAACAGACAGAATTGTGGTGCTGACAAGCCAGCCGAGTCAAAGAAATCTCCTTCACCAGCAGCAGATCAAAATGATCAGTG 857 0.4574 MSQVDNRNSSAAKRARTDGSRREDDWTCPSCGNVNFSFRTTCNMRNCTQPRPADHNSKSTAKPLQVPQGYSSSAPYIGSGAPSSMYLGVPPYGSSLFNGSSIPPYDVPFSGGSAYHYNYGSRLSAGSPYRPLHLSGPTPYSSGSMMANGGMYGIPPMVDRYGLGMPMGPGTMGPRPGFFPDDKSQKRTADATRDNDWTCPKCGNINFSFRTVCNMRKCNTPKPGSQVSKSDKNSKQKMPEGSWKCEKCNNINFPFRTKCNRQNCGADKPAESKKSPSPAADQNDQ 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g01732 285 SUPERFAMILY Ran binding protein zinc finger-like 190 225 IPR036443 -
Bva06g01732 285 MobiDBLite consensus disorder prediction 1 25 - -
Bva06g01732 285 MobiDBLite consensus disorder prediction 220 242 - -
Bva06g01732 285 PANTHER OS08G0521400 PROTEIN 5 276 - -
Bva06g01732 285 Gene3D - 228 271 - -
Bva06g01732 285 Gene3D - 14 54 - -
Bva06g01732 285 Gene3D - 185 225 - -
Bva06g01732 285 SMART zf_4 241 267 IPR001876 -
Bva06g01732 285 SMART zf_4 195 221 IPR001876 -
Bva06g01732 285 SMART zf_4 24 50 IPR001876 -
Bva06g01732 285 MobiDBLite consensus disorder prediction 11 25 - -
Bva06g01732 285 SUPERFAMILY Ran binding protein zinc finger-like 233 270 IPR036443 -
Bva06g01732 285 SUPERFAMILY Ran binding protein zinc finger-like 17 54 IPR036443 -
Bva06g01732 285 Pfam Zn-finger in Ran binding protein and others 22 44 IPR001876 -
Bva06g01732 285 Pfam Zn-finger in Ran binding protein and others 239 269 IPR001876 -
Bva06g01732 285 Pfam Zn-finger in Ran binding protein and others 194 223 IPR001876 -
Bva06g01732 285 MobiDBLite consensus disorder prediction 264 285 - -
Bva06g01732 285 PANTHER ZINC FINGER PROTEIN 5 276 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g01732 Bva-Chr6 12068485 12072690 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g01732 196 273 EF-hand Containing Proteins AT1G55040 31.250 4.58e-06 46.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g01732 - - pmum:103322078 561.992
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g01732 06 12068485 12072690 Bva06g01732 06 12068485 12072690 ECH