Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g01729 ATGGAAGGGCTGGCCATGCTGAAGCAGCTCATCGGTCAGCTTCAGGAGCTCTTGGACCTCTACGATTCTCATCCTCGTCTTCATCCTCCaccttctgcttctgcttcttcttcatctcattcttttattcttctacCTTCTCATCAACAACACTTTCGCCAACACCCCAGATGTTGCTTCCTCGATATTGATGATAGCTCTGTTGATGACTGCTGTGGCCTTGTAATGGCAGCTGGGAAGTCTGGAAGTTTCAGGATGTTGGAGCCTCTAAAGCCTCCACCCACTAAGAAGTCTCGAAAAGATCGGTGCAGGGGTAAATCATCTGGAATGCCCTGTACAACTGAAGTTATGGAACAGCAAATTTGGAAAGGTTTTCCTGCAGATTTATTTGAAGCTGTCATTGCACGACTTCCCATTGCAACATTTTTCCGCTTTCGCTCTGTCTGCTGGCAATGGAATTCCTTGCTTACTTCTCAAAGTTTTTCTCAGCATTGTGCTGAAGTCCCACAAGTAAATCCCTGGTTTTACACCATCACTCATGAAAATGTGAATTCTGGAGCCATGTATGACCCTTGTTTGAAAAAATGGCATCACCCCACCATATCAGCACTTCCCACAAAGTTGATTGTTTTACCAGTGGCTTCAGCTGGGGgtttaatttgctttcttgACATTGGTCATCGAAACTTCTATGTTTGTAACCCACTGACTCAATCTTTCAAGGAGTTGCCTGCTAGGTCAGTTAAGGTCTGGTCTCGTGTTGCGGTAGGGATGACTCTAAATGGAAAATCAGCTATTGCAGGCTACAAGATCCTGTGGGTCGGTTGTGATGGAGAGTATGAAGTTTATGACTCGGTGAAGAACTCTTGGACCCGTCCAGGAAACATGCCTGTAGGTGTTAAGCTACCACTATCACTGAACTTCAAGTCACAGGCAGTTTCAATTGATACCACACTTTACTTCATGAGATCAGATCCAGAAGGGATTGTCTCCTATGATGTGGTAACTGGGGTTTGGAAACAGTACATAATTCCTTCGCCAGTCCATCTCACTGACCACACATTGGCTGAGTGTGATGGCCGGATCATGCTTGTGGGGCTGCTGACTAAGAATGCCGCCACATGCGTGTGCATATGGGAGCTGCAGAAAATGACGCTCTTGTGGAAGGAGGTTGACAGAATGCCAAACATATGGTGCTTGGACTTTTACGGGAAGCACGTTAGAATGACTTGCCTGGGAAATAAAGGCTTGCTCATGTTCTCCTTGAGATCGAGACAAATGAATCGCTTGGTTACTTACAACATAACAAGCAGGGAATGGCTCAAGGTTCCTGTGTGTGTGGTGCCACGCGGGAGAAAACGGCAATGGATTGCTTGTGGCACTGCATTTCATCCATGTCTCACTGCAATGGCTTG 1415 0.4452 MEGLAMLKQLIGQLQELLDLYDSHPRLHPPPSASASSSSHSFILLPSHQQHFRQHPRCCFLDIDDSSVDDCCGLVMAAGKSGSFRMLEPLKPPPTKKSRKDRCRGKSSGMPCTTEVMEQQIWKGFPADLFEAVIARLPIATFFRFRSVCWQWNSLLTSQSFSQHCAEVPQVNPWFYTITHENVNSGAMYDPCLKKWHHPTISALPTKLIVLPVASAGGLICFLDIGHRNFYVCNPLTQSFKELPARSVKVWSRVAVGMTLNGKSAIAGYKILWVGCDGEYEVYDSVKNSWTRPGNMPVGVKLPLSLNFKSQAVSIDTTLYFMRSDPEGIVSYDVVTGVWKQYIIPSPVHLTDHTLAECDGRIMLVGLLTKNAATCVCIWELQKMTLLWKEVDRMPNIWCLDFYGKHVRMTCLGNKGLLMFSLRSRQMNRLVTYNITSREWLKVPVCVVPRGRKRQWIACGTAFHPCLTAMA 471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g01729 471 Pfam F-box domain 125 161 IPR001810 GO:0005515
Bva06g01729 471 MobiDBLite consensus disorder prediction 86 110 - -
Bva06g01729 471 SUPERFAMILY F-box domain 117 189 IPR036047 GO:0005515
Bva06g01729 471 PANTHER F-BOX/KELCH-REPEAT PROTEIN 53 471 - -
Bva06g01729 471 SMART fbox_2 125 165 IPR001810 GO:0005515
Bva06g01729 471 SUPERFAMILY Galactose oxidase, central domain 186 452 IPR011043 -
Bva06g01729 471 Gene3D - 171 458 IPR015915 GO:0005515
Bva06g01729 471 PANTHER BNAA07G08860D PROTEIN 53 471 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g01729 Bva-Chr6 12051361 12054805 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g01729 - - gmx:100810179 801.201
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g01729 06 12051361 12054805 Bva06g01729 06 12051361 12054805 ECH