Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Bva06g01694 | atGAAGACTTCTCTGAGAAAGTTGCGCGGTCTTGCACTTCACAAACTTGACGGCAAGGACCGCAGGAACATTCGACCTTTGGCTCAGTCGGATGAGCTCGCTCAGGCTACCCAGGACATGCAAGACATGAGAGACTGCTACGATAGCTTCCTTtctgcagcagcagcaacagccAACAGTGCTTAtgAATTCTCAGAGTCCTTACGGGAATTGGGTTCTTGTCTTCTTGAGAAAACTGCAttaaatgatgatgaagaaagtGGAAAAGTTCTGCTAATGCTTGGGAAGATGCAGTTTGAACTCCAAAAACTTGTTGATAACTATCGTTCTCATATATTCCAGACTATTACAATTCCATCAGAGTCTCTTTTGAATGAACTTCGAACTGTTGAGGAGATGAAGCGACTGTGCGATGAAAAAAGggATGTATATGAGTACATGGTAACAAGATGCAGAGAAAGAGGGAGATCTGGAGGTGAAAAAGGAGAGAGTTTTTCCTTGCAGCAATTGCAAACTGCTAGTGAAGAATATGATGAGGAAGCaacattatttgttttccGTTTGAAATCTCTTAAGCAAGGACAGTCACGTAGTCTTCTAACACAGGCAGCACGCCACCATGCTGCTCAGTTGTGTTTCTTCAAGAAAGCTTTTAAGTCTCTTGAGACAGTGGAGCCACACGTAAAGTCAGTAACTGAACAGCAACACATTGATTACCAGTTCATTGGtcttgaagatgatgatgtagatgaagatgatgatggagACGATGACGATGAAGGTTTTGATGAGAATGATGATGGGGAGTTGAGTTTTGACTATGGACGAAATGAACTGGAAAAGGATGCTTCTACATCACGAAACTCAATGGAGTTGGACCAGGTGGAGCTTACATTTACCCAAGGTTCAACAGTAGATGCTTTTAAGGAAAACTTGGACAGGCTTCACAGGAATTCTTTCTCCTTTAGGGTTAGGAGCAGCAGCCAATCAGCCCCACTTTTTGCTGAGAATAAACCTGACTCTAGTGAAATACTGAGACAGATGCGCCCATCTTTATCTAGGAAGTTCCATACATATGTGCTACCCACACCAGTTGATGCAAAGAGTTCAACTTCTCCTGGATCAACTAGTCCCGTGCCTTCAAAAGCAAAGACTAGTTTAAGTGAGCCTCCAGAGAATTTGTGGCTTTCCTCCCCCTTGGAACGAAGGAAATATGAAAAGGTAGTTGGCGACGAGAAGttttctgatcctattgttaGAAAAGCACAATCTATACTCAAGGAGAGTAACAGCAATATTGCCTCCACAAGAATGCCACCTCCTTTGGTAGATGGTGTTTTATCTCCAAATCATGATTCTGTTGACGCTTATtctaaaaagattaaaaggcAAGCCTTTTCTGGTCCATTGACAAGTAAGCCTTGGCCTGCCCAGCCAGTCTCAGCAGAACCTGTCCAATTGTTTTCTGGTCCGCTTTTGCGGACTACAGTGCCACAGCCTTCATCAACATCTCCAAAAGTATCTCCTAGTGCTTCCCCTACTTTTACATCTTCACCTAAAATAAGTGAGCTTCATGAGCTTCCTAGGCCTCCAACCATTTCGCCAATCAAGTCTTCAAGACTTTTGGGTTTGGTAGGTTATTCAGGTCCATTGGTGTCAAGAGGTCAAGTTCTTTCTGCTGCAAATAAGTCAGGTACCTCGAATGCTGCATCTCCACTGCCAACACCTCCTCAAGCTATGTCTCGTAGTTTCTCCATACCTTCTAGTGGTGCTAGAGCTGCAGCATTGCATGAATCAGAGCCACTGGAAGCTTCTCATAGACCACGTCTTTCGGAGCATATTGATTCTCCTCTGACGCCTATAGCTTTATCTAGTAATCCACCGTCATCAGATGGCTCTGAGACTGCTGCTCAAACTGTTTA | 1922 | 0.4105 | MKTSLRKLRGLALHKLDGKDRRNIRPLAQSDELAQATQDMQDMRDCYDSFLSAAAATANSAYEFSESLRELGSCLLEKTALNDDEESGKVLLMLGKMQFELQKLVDNYRSHIFQTITIPSESLLNELRTVEEMKRLCDEKRDVYEYMVTRCRERGRSGGEKGESFSLQQLQTASEEYDEEATLFVFRLKSLKQGQSRSLLTQAARHHAAQLCFFKKAFKSLETVEPHVKSVTEQQHIDYQFIGLEDDDVDEDDDGDDDDEGFDENDDGELSFDYGRNELEKDASTSRNSMELDQVELTFTQGSTVDAFKENLDRLHRNSFSFRVRSSSQSAPLFAENKPDSSEILRQMRPSLSRKFHTYVLPTPVDAKSSTSPGSTSPVPSKAKTSLSEPPENLWLSSPLERRKYEKVVGDEKFSDPIVRKAQSILKESNSNIASTRMPPPLVDGVLSPNHDSVDAYSKKIKRQAFSGPLTSKPWPAQPVSAEPVQLFSGPLLRTTVPQPSSTSPKVSPSASPTFTSSPKISELHELPRPPTISPIKSSRLLGLVGYSGPLVSRGQVLSAANKSGTSNAASPLPTPPQAMSRSFSIPSSGARAAALHESEPLEASHRPRLSEHIDSPLTPIALSSNPPSSDGSETAAQTV | 640 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Bva06g01694 | 640 | CDD | BAR | 39 | 227 | - | - | |
| Bva06g01694 | 640 | MobiDBLite | consensus disorder prediction | 563 | 640 | - | - | |
| Bva06g01694 | 640 | MobiDBLite | consensus disorder prediction | 245 | 268 | - | - | |
| Bva06g01694 | 640 | MobiDBLite | consensus disorder prediction | 493 | 521 | - | - | |
| Bva06g01694 | 640 | MobiDBLite | consensus disorder prediction | 618 | 640 | - | - | |
| Bva06g01694 | 640 | MobiDBLite | consensus disorder prediction | 563 | 588 | - | - | |
| Bva06g01694 | 640 | MobiDBLite | consensus disorder prediction | 364 | 395 | - | - | |
| Bva06g01694 | 640 | PANTHER | BNAA05G10100D PROTEIN | 1 | 640 | - | - | |
| Bva06g01694 | 640 | SUPERFAMILY | BAR/IMD domain-like | 30 | 230 | IPR027267 | - | |
| Bva06g01694 | 640 | Gene3D | Arfaptin homology (AH) domain/BAR domain | 28 | 242 | IPR027267 | - | |
| Bva06g01694 | 640 | PANTHER | HYDROXYPROLINE-RICH GLYCOPROTEIN-LIKE | 1 | 640 | IPR037488 | - | |
| Bva06g01694 | 640 | MobiDBLite | consensus disorder prediction | 245 | 274 | - | - | |
| Bva06g01694 | 640 | MobiDBLite | consensus disorder prediction | 364 | 393 | - | - | |
| Bva06g01694 | 640 | MobiDBLite | consensus disorder prediction | 493 | 535 | - | - | |
| Bva06g01694 | 640 | MobiDBLite | consensus disorder prediction | 599 | 613 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Bva06g01694 | Bva-Chr6 | 11871236 | 11876259 | Wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Bva06g01694 | - | - | gmx:100778278 | 849.736 |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Bva06g01694 | 06 | 11871236 | 11876259 | Bva06g01694 | 06 | 11871236 | 11876259 | ECH |