Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g01677 ATGGAGTTGCAACCTGAAGAAGGTTTGCGTGATAAGGATCCACAAGGCAGCTCAGAAGCAGAAATCAATGAGATTGAGCGAAGCAAAGTGGGTATTATGCGAGCCCTGATCGAGAGAGAGGATCCCTCTTCCAAGgAAGTGGATGATTTTGCAATCCGAAGATTTTTACGAGCTCGTGATCTAGATATTGAGAAGGCCTCTAGCCTATTGTTGAAGTACCTGAACTGGAGGCGAACCTTTGTCCCAAAGGGCTTCATCTCTGAAACGGAAATTCCAGATCAACTTGCTCATAACAAGTTATTTATGCAAGGGCTAGACAAGAAAGGGCGCCCTATTGTGCTTGTCTTTGGTGCCAGGCACAAGCCAACCAAAGGAGGTGTAGAAGACTTCAAGCGTTTTGTGGTCTACACCCTCGACAAAATATGTGCCAGGATGCCAAGAGGACAGGAGAAGTTTGTGTCAATTGCAGATCTTGAAGGGTGGGGTTACTCCAGTTGCGATATTCGCGGATACCTCGCTGCTTTATCAATATTGCAGGACTGCTTTCCGGAGAGGTTGGGGAAGTTATTTATGGTGCATGTGCCTTATATATTCATGGCCGCGTGGAAAATGGTTTACCCTTTTGTTGACagcaaaaccaaaaagaagATAATTTTTGTggagaacaaaaaattgacatCTACCTTGCTAGAGGACATTGATGAAAGCCAACTCCCAGATATCTATGGCGGCAAGCTCCAGCTAATACCCATCCAGTCATGTTG 764 0.4346 MELQPEEGLRDKDPQGSSEAEINEIERSKVGIMRALIEREDPSSKEVDDFAIRRFLRARDLDIEKASSLLLKYLNWRRTFVPKGFISETEIPDQLAHNKLFMQGLDKKGRPIVLVFGARHKPTKGGVEDFKRFVVYTLDKICARMPRGQEKFVSIADLEGWGYSSCDIRGYLAALSILQDCFPERLGKLFMVHVPYIFMAAWKMVYPFVDSKTKKKIIFVENKKLTSTLLEDIDESQLPDIYGGKLQLIPIQSC 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g01677 254 MobiDBLite consensus disorder prediction 1 24 - -
Bva06g01677 254 SUPERFAMILY CRAL/TRIO domain 91 247 IPR036865 -
Bva06g01677 254 PRINTS Cellular retinaldehyde-binding protein signature 202 221 - -
Bva06g01677 254 PRINTS Cellular retinaldehyde-binding protein signature 169 190 - -
Bva06g01677 254 PRINTS Cellular retinaldehyde-binding protein signature 51 73 - -
Bva06g01677 254 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 88 250 IPR001251 -
Bva06g01677 254 PANTHER BINDING PROTEIN, PUTATIVE-RELATED 8 254 - -
Bva06g01677 254 SMART sec14_4 94 247 IPR001251 -
Bva06g01677 254 SUPERFAMILY CRAL/TRIO N-terminal domain 21 85 IPR036273 -
Bva06g01677 254 SMART CRAL_TRIO_N_2 48 73 IPR011074 -
Bva06g01677 254 Pfam CRAL/TRIO domain 97 244 IPR001251 -
Bva06g01677 254 Gene3D - 17 251 IPR036865 -
Bva06g01677 254 CDD SEC14 101 245 IPR001251 -
Bva06g01677 254 PANTHER OS03G0850700 PROTEIN 8 254 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g01677 Bva-Chr6 11774895 11777807 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g01677 54 217 Acyl Lipid Metabolism Gene Families AT5G47730 25.843 2.45e-13 67.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g01677 - - tcc:18608827 392.889
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g01677 06 11774895 11777807 Bva06g01677 06 11774895 11777807 ECH