Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g01649 ATGTGGTATCGAAGTTATCTTCATTTGTCTAAATTCAAACTCAGAACTGGACTCGACGTAGGCCTAGGGTTTATCAGAAGATCATTCTCTTCTGAGCCAGGAAAGCGCTTTGCGGTGTTGTGGGGCAATGGGGATTATGGGAGATTAGGTCTCGGGAGCCTAGATTCTCAGTGGGGACCTGTGCTTTGTTCTTCTGCCTTTCAGAACCAAAGCCTTAAAGCCATTGCTTGTGGGGGTGCTCACACTCTCTTCTTAACAGAAAACGGGCGTGTTTATGCTACTGGTCTTAATGATTTTGGACAGCTTGGCATATCAGAGAACAAACATTACTCAATGGAGCCACTTGAGGTTTTTGGGCTTCCGAAAGAAATTGATCAAATCTCTGTTGGTTATAATCATTCTTGTGCAATTACAGTGGATGGAGAATTGTACATGTGGGGGAAGAACACAAGTGGGCAGCTCGGACTAGGAAAAAGTGCTGCAAAGCTAGTTCCTTTGCCAACTAAATTGGAATGCTTGGATggattaaagattaaaatggcAGCTCTAGGCTCTGAGCACTCAGTGGCTCTTGCTGATGGAGGAGAGGCCTTGAGTTGGGGTATGGGAGGGTCTGGTAGGCTTGGTCATGGTCATGAGCTAAGCTTTCTAGGATTCTTTAAAACTAAAAGTGAGTATACTCCAAGGCTTATAAAAGATCTTGAGGGAATCAAGGTTAACTATGTTGCAGCTGGGTTGCTACATTCGGCTTGTATTGATGAAAATGGTTCTGTTTACATGTTTGGTGAAAGAGGGGTTGATAAATTGAATTTGGGGGAGATGAACAAATCAACAAAACCATCATTGATTAGTGAACTTCCTTACTCTGAAGAAGTTGCATGTGGTGGCTATCACACCTGTGTCCTGACAAggTCTGGCGAGCTTTACACTTGGGgatcaaatgaaaatggcTGCCTTGGTATTGGTTCCTCAGATGTCATTCATCTACCTGAAAAGGTGCAAGGTCCATTCTTGAAGTCTTCAGTTACCCAGGTATCTTGTGGTTGGAAGCACACAGCAGCAATTTCTGAAGGAAAATTTTTCACATGGGGTTGGGGAGGTTCGCATGGGACTTTCTCTGAAGTTGGACATTCCTCTGGCGGACAACTGGGTCACGGAAGCGATGTGGACTACATAAATCCAACGATGGTTTGTCTTGGAGAAAAGGTGAACGCAGTGCAAGTTTCATGTGGGTTCAATCATACAGGTGCTTTAATTGAGTATACGTA 1268 0.429 MWYRSYLHLSKFKLRTGLDVGLGFIRRSFSSEPGKRFAVLWGNGDYGRLGLGSLDSQWGPVLCSSAFQNQSLKAIACGGAHTLFLTENGRVYATGLNDFGQLGISENKHYSMEPLEVFGLPKEIDQISVGYNHSCAITVDGELYMWGKNTSGQLGLGKSAAKLVPLPTKLECLDGLKIKMAALGSEHSVALADGGEALSWGMGGSGRLGHGHELSFLGFFKTKSEYTPRLIKDLEGIKVNYVAAGLLHSACIDENGSVYMFGERGVDKLNLGEMNKSTKPSLISELPYSEEVACGGYHTCVLTRSGELYTWGSNENGCLGIGSSDVIHLPEKVQGPFLKSSVTQVSCGWKHTAAISEGKFFTWGWGGSHGTFSEVGHSSGGQLGHGSDVDYINPTMVCLGEKVNAVQVSCGFNHTGALIEYT 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g01649 422 Gene3D - 35 216 IPR009091 -
Bva06g01649 422 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 89 140 IPR000408 -
Bva06g01649 422 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 141 194 IPR000408 -
Bva06g01649 422 Pfam Regulator of chromosome condensation (RCC1) repeat 73 101 - -
Bva06g01649 422 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 306 358 IPR000408 -
Bva06g01649 422 PRINTS Chromosome condensation regulator RCC1 signature 197 211 IPR000408 -
Bva06g01649 422 PRINTS Chromosome condensation regulator RCC1 signature 72 85 IPR000408 -
Bva06g01649 422 PRINTS Chromosome condensation regulator RCC1 signature 37 53 IPR000408 -
Bva06g01649 422 PRINTS Chromosome condensation regulator RCC1 signature 295 313 IPR000408 -
Bva06g01649 422 PRINTS Chromosome condensation regulator RCC1 signature 181 197 IPR000408 -
Bva06g01649 422 PRINTS Chromosome condensation regulator RCC1 signature 353 374 IPR000408 -
Bva06g01649 422 PRINTS Chromosome condensation regulator RCC1 signature 141 157 IPR000408 -
Bva06g01649 422 PRINTS Chromosome condensation regulator RCC1 signature 91 107 IPR000408 -
Bva06g01649 422 ProSitePatterns Regulator of chromosome condensation (RCC1) signature 2. 242 252 IPR000408 -
Bva06g01649 422 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 195 255 IPR000408 -
Bva06g01649 422 Gene3D - 217 421 IPR009091 -
Bva06g01649 422 SUPERFAMILY RCC1/BLIP-II 340 418 IPR009091 -
Bva06g01649 422 SUPERFAMILY RCC1/BLIP-II 39 367 IPR009091 -
Bva06g01649 422 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 358 421 IPR000408 -
Bva06g01649 422 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 36 88 IPR000408 -
Bva06g01649 422 PANTHER UBIQUITIN-PROTEIN LIGASE E3A-RELATED 34 421 - -
Bva06g01649 422 Pfam Regulator of chromosome condensation (RCC1) repeat 195 252 IPR000408 -
Bva06g01649 422 Pfam Regulator of chromosome condensation (RCC1) repeat 376 418 IPR000408 -
Bva06g01649 422 Pfam Regulator of chromosome condensation (RCC1) repeat 305 355 IPR000408 -
Bva06g01649 422 Pfam Regulator of chromosome condensation (RCC1) repeat 140 191 IPR000408 -
Bva06g01649 422 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 256 305 IPR000408 -
Bva06g01649 422 PANTHER OS11G0545800 PROTEIN 34 421 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g01649 Bva-Chr6 11618373 11624276 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g01649 - - vun:114196144 674.47