Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g01647 ATGGCAACGACTGCTTGTTTCATCATTGTTAGCAGAAATGATATCCCTATATATGAAGCTGAAGTTGGATCAGCTGCTAAGAGAGAGGATGCTGCTCAGCTGCATCAATTCATCTTACACGCCGCGCTCGATATTGTTCAGGACCTTGCATGGACTACCAGTGCTATGTACTTGAAATCAATAGACAGGTTTAATGATTTGGTGGTGTCGGTGTATGTCACAGCTGGTCATATCCTCTG 239 0.4393 MATTACFIIVSRNDIPIYEAEVGSAAKREDAAQLHQFILHAALDIVQDLAWTTSAMYLKSIDRFNDLVVSVYVTAGHIL 79
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g01647 79 SUPERFAMILY SNARE-like 1 78 IPR011012 -
Bva06g01647 79 CDD TRAPPC2_sedlin 4 78 - -
Bva06g01647 79 Gene3D - 1 79 - -
Bva06g01647 79 PANTHER TRAFFICKING PROTEIN PARTICLE COMPLEX SUBUNIT 2 1 79 IPR006722 GO:0006888
Bva06g01647 79 Pfam Sedlin, N-terminal conserved region 9 78 IPR006722 GO:0006888
Bva06g01647 79 PANTHER BNAC06G40500D PROTEIN 1 79 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g01647 Bva-Chr6 11605527 11606787 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g01647 K20301 - tcc:18602414 151.369