Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g01645 aTGAGCGGTCAGGTGCCCCATCCTGCTCCCAGGAAGCATACCCAGAAACGGGCTCCGTCGACCTCCAGGAAATCCACCTCTCTCGATAATGGAAGCACCAACGGCACTTCTAGCAAACCTTCATCTCCTCCTGCCCCATCGACCGCTGCGGGGGAAAGGACAGTCAAGAAGCTTCGGTTGTCGAAAGCGCTTACTATTCCCGAGGGGACAACAGTTTCTGAAGCATGTCGACGCATGGCAGCTCGCCGTGTTGATGCTGTTTTGTTAACTGATGCTAGTGCTTTGCTTTCAGGAATTGTGACGGACAAGGACATCGCTACTAGAGTTATAGCTGAGGGATTACGACCAGAGCAGACAATAGTGTCGAAAGTAATGACACGGAATCCTATATTTGTAACTGCAGATTCACTGGCCATAGAGGCTCTTCAGAAGATGATACAGGGTAAATTCAGGCACCTTCCGGTTGTGGAAAATGGTGAAGTAATTGCCTTGCTGGATATTACCAGGTGTCTCTATGATGCCATATCAAGAATGGAGAAGGCTGCTGAGCAAGGGAGTGCAATTGCCGCTGCAGTTGAGGGGGTAGAGCGCCAGTGGGGTAGCAATTTATCTGCTCCATATGCTTTTATTGAAACACTGAGGGAGCGCATGTTCAAGCCTTCCCTGTCAACTATAATTGGTGACAATGCAAAGGTTGCTGTTGCATCAGCGGCAGATCCTGTCTATGTTGCTGCAAAAAAGATGCGGGATTTGCGTGTTAATTCAGCTGTCATTGTGACAGGAAACAAGATCCAGGGGATACTCAcTTCGAAGGATATACTTATGCGGGTTGTGGCTCAAAATCTTTCTCCTGAATTGACTCTAGTGGAAAAGGTAATGACTCCAAATCCGGAATGTGCATCCTTTGAGACAACAATTCTTGACGCACTGCATATGATGCATGATGGGAAGTTCTTACATCTTCCTGTCCTAGACAGAGATGGATATGTTGTTGCTTGTGTGGATGTTCTGCAGATAAGTCATGCAGCTCTTTCTATgGTTGAGAGTAGCTCTGGATCTGTTAATGATATGGCAAACACGATGATGCAAAAATTTTGGGACTCAGCACTTGCGTTGGAGCCTCCAGATGATTATGACAATCATAGTGACGTTTCTGCACTAATGACGTCAGAAGGGACGGAAACTGCGAAGTCCACATATCCATCTGTTGGTTTTGGAAATTCATTTACCTTTAAATTTGAGGATCCTAAGGGTCGTGTACATCGAATCAACTGTGGCTTTGAAAATCTAGATGAGCTTGTGTCAACCATCATGCAAAGAGTCGGTGATGTTAGTGATGGAAAACGTCCTCACATTATGTATGAGGATGATGAAGGTGATAAAATTCTTCTTGCCACACACAGCGATCTTGTTGCTGCTGTCAGCTATGCCAGATCTGTAAATGCGAAGGCTCTAAGGTTGCATTTGGACTTTGCCGATTCAAGCGAAGAGTCGAGAGAACGACCTATTACAGCCACCAGAAAGAAAACCAGTCTATTTTCTTCCGGGTCTGGTGTTTTTGCCGGTGCCGTTGTTCTGACAAGCATTGGTGTCTTGGTCTACTTGAAGCGCTCGAAACAGTG 1622 0.4605 MSGQVPHPAPRKHTQKRAPSTSRKSTSLDNGSTNGTSSKPSSPPAPSTAAGERTVKKLRLSKALTIPEGTTVSEACRRMAARRVDAVLLTDASALLSGIVTDKDIATRVIAEGLRPEQTIVSKVMTRNPIFVTADSLAIEALQKMIQGKFRHLPVVENGEVIALLDITRCLYDAISRMEKAAEQGSAIAAAVEGVERQWGSNLSAPYAFIETLRERMFKPSLSTIIGDNAKVAVASAADPVYVAAKKMRDLRVNSAVIVTGNKIQGILTSKDILMRVVAQNLSPELTLVEKVMTPNPECASFETTILDALHMMHDGKFLHLPVLDRDGYVVACVDVLQISHAALSMVESSSGSVNDMANTMMQKFWDSALALEPPDDYDNHSDVSALMTSEGTETAKSTYPSVGFGNSFTFKFEDPKGRVHRINCGFENLDELVSTIMQRVGDVSDGKRPHIMYEDDEGDKILLATHSDLVAAVSYARSVNAKALRLHLDFADSSEESRERPITATRKKTSLFSSGSGVFAGAVVLTSIGVLVYLKRSKQ 540
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g01645 540 SUPERFAMILY CBS-domain pair 231 342 IPR046342 -
Bva06g01645 540 SUPERFAMILY CAD & PB1 domains 398 489 - -
Bva06g01645 540 SMART PB1_new 408 492 IPR000270 GO:0005515
Bva06g01645 540 ProSiteProfiles PB1 domain profile. 406 492 IPR000270 GO:0005515
Bva06g01645 540 ProSiteProfiles CBS domain profile. 125 180 IPR000644 -
Bva06g01645 540 PANTHER CBS DOMAIN-CONTAINING PROTEIN CBSCBSPB3 12 518 IPR034896 -
Bva06g01645 540 MobiDBLite consensus disorder prediction 20 48 - -
Bva06g01645 540 SUPERFAMILY CBS-domain pair 52 170 IPR046342 -
Bva06g01645 540 Pfam CBS domain 121 166 IPR000644 -
Bva06g01645 540 Pfam CBS domain 289 331 IPR000644 -
Bva06g01645 540 Pfam CBS domain 231 276 IPR000644 -
Bva06g01645 540 Pfam CBS domain 61 107 IPR000644 -
Bva06g01645 540 ProSiteProfiles CBS domain profile. 228 285 IPR000644 -
Bva06g01645 540 PANTHER AMP-ACTIVATED PROTEIN KINASE, GAMMA REGULATORY SUBUNIT 12 518 - -
Bva06g01645 540 ProSiteProfiles CBS domain profile. 59 117 IPR000644 -
Bva06g01645 540 Pfam PB1 domain 409 490 IPR000270 GO:0005515
Bva06g01645 540 SMART cbs_1 231 278 IPR000644 -
Bva06g01645 540 SMART cbs_1 62 110 IPR000644 -
Bva06g01645 540 SMART cbs_1 128 172 IPR000644 -
Bva06g01645 540 SMART cbs_1 296 344 IPR000644 -
Bva06g01645 540 MobiDBLite consensus disorder prediction 1 53 - -
Bva06g01645 540 Gene3D - 221 364 IPR046342 -
Bva06g01645 540 CDD CBS_pair_MUG70_1 60 176 - -
Bva06g01645 540 CDD CBS_pair_MUG70_2 231 345 - -
Bva06g01645 540 Gene3D - 41 190 IPR046342 -
Bva06g01645 540 ProSiteProfiles CBS domain profile. 293 349 IPR000644 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g01645 Bva-Chr6 11594236 11598957 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g01645 - - egr:104415970 814.298
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g01645 06 11594236 11598957 Bva06g01645 06 11594236 11598957 ECH