Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g01635 ATGAAGATAGGGAAGGTGGGATTCTTGGTGCTTACAGTGTTGCTGTTGAACTGGTCACTGTCTTCAGCTTGGTTTGGCGATAAACAGCGAAAGAAGTCCATTATACCAGCGGAAACGACGTCGTCATGGGTCCTGAATCGTGCTGGTGCAGCTGGGTCCTCCATCGTTTTCCCAGTTCACGGAAACGTTTATCCTATTGGGTCCTATAATGTCACTCTCAATATGGGACAGCCACCGAGGCCCTATTTTCTTGACGTTGACACGGGCAGTGACCTCACATGGCTCCAATGCGATGCCCCTTGTTCCCATTGCTCTGAGACACCTCATCCGCTTTACCGGCCCAGCAATGACTTGGTGGCCTGCAGGGATCCTCTGTGCGCGTCCTTGCAGCCAAGTGATGACTACAGATGTGACCACCCAGAGCAGTGCGACTATGAAATTGAATATGCAGATCATTATTCAACTCTTGGTGTTCTTGTACGGGACATCTTCCTTCTCAATTTTACAAATGGAAACCAACTTAAAGTCCGCATGGCCCTTGGATGCGGTTACGATCAGATTTTCCCGGCTTCTTCTTACCATCCCTTGGATGGAATTCTTGGCCTTGGCAGAGGAAAATCCAGCTTGATATCACAGCTTTCTAGTCAGGGATTGGTGCGAAATGTAGTTGGACATTGTTTAAGCGTACACGGAGGAGGATACATCTTCTTTGGGGATCTTCATGATTATTCTCGAGTGACTTGGACTCCAATGTCACCTTACTATTCCAAATACTCACCAGAAGTTGCCGAGCTCATTGTTGGAGGGAGGGCAACCGGGGTTGGAAATCTCGTTACTATTTTTGATACTGGAAGCTCCTACACTTACTTCAACTCTAAGGCATATCAAGCATTGGTTTCTTGGTTGGAGAAGGAATTGAGTGGAAAGCCACTGAAAGAAGCACCAGAAGACCGGAACTTGGATCGTTGTTGGCGAGGGAGAAAGCCCTTCAAAAGCGTACGTGATGTCAGGAAATACTTCAAGCCTGTGGCACTGAATTTCCCCAGTGGTGGGAGAGCCAAAGCTCAGTTCGAAATCCCTCCCGAAGCTTATCTGATAATTTCAAACAAGGGAAATGTCTGCTTGGGAATTCTAAACGGCAGTGAAGTAGGGATGGAAGACTTGAACCTGATTGGAGACATATCTATGCAAGATAAAGTGATGGTATACGACAATGAGAAGCAGTTGATTGGTTGGGCACCGGCAAACTGTGATCGGATTCCAAGATCCAGAGACGTCAGCTTCTG 1286 0.4736 MKIGKVGFLVLTVLLLNWSLSSAWFGDKQRKKSIIPAETTSSWVLNRAGAAGSSIVFPVHGNVYPIGSYNVTLNMGQPPRPYFLDVDTGSDLTWLQCDAPCSHCSETPHPLYRPSNDLVACRDPLCASLQPSDDYRCDHPEQCDYEIEYADHYSTLGVLVRDIFLLNFTNGNQLKVRMALGCGYDQIFPASSYHPLDGILGLGRGKSSLISQLSSQGLVRNVVGHCLSVHGGGYIFFGDLHDYSRVTWTPMSPYYSKYSPEVAELIVGGRATGVGNLVTIFDTGSSYTYFNSKAYQALVSWLEKELSGKPLKEAPEDRNLDRCWRGRKPFKSVRDVRKYFKPVALNFPSGGRAKAQFEIPPEAYLIISNKGNVCLGILNGSEVGMEDLNLIGDISMQDKVMVYDNEKQLIGWAPANCDRIPRSRDVSF 428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g01635 428 PANTHER ASPARTYL PROTEASES 2 422 IPR001461 GO:0004190|GO:0006508
Bva06g01635 428 Gene3D Acid Proteases 239 420 IPR021109 -
Bva06g01635 428 PRINTS Pepsin (A1) aspartic protease family signature 279 290 IPR001461 GO:0004190|GO:0006508
Bva06g01635 428 PRINTS Pepsin (A1) aspartic protease family signature 75 95 IPR001461 GO:0004190|GO:0006508
Bva06g01635 428 PRINTS Pepsin (A1) aspartic protease family signature 389 404 IPR001461 GO:0004190|GO:0006508
Bva06g01635 428 ProSiteProfiles Peptidase family A1 domain profile. 69 413 IPR033121 -
Bva06g01635 428 Pfam Xylanase inhibitor C-terminal 275 413 IPR032799 -
Bva06g01635 428 Gene3D Acid Proteases 46 238 IPR021109 -
Bva06g01635 428 PANTHER EUKARYOTIC ASPARTYL PROTEASE FAMILY PROTEIN 2 422 - -
Bva06g01635 428 SUPERFAMILY Acid proteases 61 420 IPR021109 -
Bva06g01635 428 Pfam Xylanase inhibitor N-terminal 69 239 IPR032861 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g01635 Bva-Chr6 11549961 11553504 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g01635 53 423 Miscellaneous Gene Families AT1G44130 50.802 9.67e-140 404
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g01635 - - gmx:100783051 654.44
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g01635 06 11549961 11553504 Bva06g01635 06 11549961 11553504 ECH