Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g01580 atggatATTTGGAAATGGGTTTTCATTGGGCTTATTTGTGCTGCCTTTATCTGTACAAATGCTGCAGTGGAGCGGGGCCGAAATCAACATACTGAGCGGATTTCAGGTAGTGCTGGTGATGTGCTGGACGATGATCCAGTTGGAAGGTTGAAGGTTTTTGTTTATGAACTTCCAagcaaatataataaaaaaattctgcaaaaGGACCCAAGATGTCTTACCCATATGTTTGCAGCTGAGATTTTCATGCACCGGTTTCTCCTATCTAGCGCTGTTCGAACCCTTAATCCTGAAGAAGCTGATTGGTTTTATACTCCCGTATACGCCACATGTGACTTGACTCCAAATGGCCTCCCTTTACCTTTCAAGTCACCACGAATGATGAGAAGTGCTATACAGCTTATTTCTTCAAACTGGCCTTATTGGAACAGGACAGGGGGGGCAgatcatttctttctcaccCCTCATGACTTTGGAGCATGCTTCCATTATCTAGAAGAGAAGGCAATTGAAAGAGGTATTCTTCCCTTGCTACAGCGTGCTACCTTGGTTCAAACATTTGGACAGAGGAATCATGTGTGCTTGAAAGAGGGCTCCATCATCATTCCTCCATATGCTCCACCACAAAAAATGCATACGCACCTAATTCCTGAAAAAACCCCTAGGtccatttttgtttacttCAGAGGACTGTTTTATGATGTAGGAAATGACCCTGAAGGTGGTTACTATGCAAGagGTGCAAGAGCTGCAGTGTGGGAGAACTTTAAGGACAATCCACTTTTTGACATCTCCACTGAGCATCCAACCACTTACTACGAGGACATGCAGAGAGCTGTTTTTTGTTTGTGCCCACTTGGCTGGGCCCCTTGGAGCCCAAGATTGGTTGAAGCTGTGATATTTGGTTGCATCCCTGTTATCATTGCAGATGATATTGTTCTACCATTTGCTGATGCAATCCCATGGGAAGAGATCGGTGTGTTCGTTGACGAGGAAGATGTCCCTAAGTTGGATACTATACTGACATCTATCCCACAGGAAGTAATATTGAGGAAGCAAAGATTGCTTGCTAACCCTTCAATGAAACAAGCAATGTTATTCCCACAGCCTGCTCAACCAGGAGATGCTTTCCATCAGGTTCTAAATGGGCTGGCTCGTAAGTTGCCACATGACAGGAGTATATACTTGAAGCCAGGGCAGAAGGTCTTGAATTGGACTGCTGGCCCTGTGGGTGACCTCAAACCGTGGTA 1250 0.4304 MDIWKWVFIGLICAAFICTNAAVERGRNQHTERISGSAGDVLDDDPVGRLKVFVYELPSKYNKKILQKDPRCLTHMFAAEIFMHRFLLSSAVRTLNPEEADWFYTPVYATCDLTPNGLPLPFKSPRMMRSAIQLISSNWPYWNRTGGADHFFLTPHDFGACFHYLEEKAIERGILPLLQRATLVQTFGQRNHVCLKEGSIIIPPYAPPQKMHTHLIPEKTPRSIFVYFRGLFYDVGNDPEGGYYARGARAAVWENFKDNPLFDISTEHPTTYYEDMQRAVFCLCPLGWAPWSPRLVEAVIFGCIPVIIADDIVLPFADAIPWEEIGVFVDEEDVPKLDTILTSIPQEVILRKQRLLANPSMKQAMLFPQPAQPGDAFHQVLNGLARKLPHDRSIYLKPGQKVLNWTAGPVGDLKPW 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g01580 416 Pfam Exostosin family 49 344 IPR040911 -
Bva06g01580 416 PANTHER EXOSTOSIN HEPARAN SULFATE GLYCOSYLTRANSFERASE -RELATED 12 410 IPR004263 GO:0006486|GO:0016757
Bva06g01580 416 PANTHER BETA-1,4-XYLOSYLTRANSFERASE IRX10L-RELATED 12 410 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g01580 Bva-Chr6 11293810 11297341 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g01580 K20870 - pvy:116135749 808.905
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g01580 06 11293810 11297341 Bva05g00182 05 877568 881570 ECH
Bva06g01580 06 11293810 11297341 Bva06g01580 06 11293810 11297341 ECH