Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g01578 ATGGAGGCACTGAAGGCGATAATAAACCCCAGGCGATCACAATTGAAGTCCAATGAAGAAGCGTTGACTTGCGCAAATAAAGAAGCAATAATATCAGAAGTGGCTTTAGATGACTGCTTCCTCAAGAACAGCACCAAGACCGAGCAAGCCAAAGTTCGCCTCGTGAGGAGTTACGTCGAAAGCAAGGATCCCTCGGCTAAGGAAGAAGATGACCAGATGATTCGAAGATTCTTGCGAGCTCGTGATTTAGATATTGAGAAAGCATCAGCAATGTTCCTCAAGTACTTGAAATGGAGACATTCATTTGTTCCGACCGGTTCTATATCTGCATCGGAGATTCCTAATGAGCTTGCACAGGAAAAGATGTTCGTGCAAGGATTCGATAACAAAGGACGACCTATAGGATTTGTCTTCGGTGCCAAACATTTTCAAAGCAAAGATGATCCTGACGAGTTCAAACGTTTTGTAATCTATGTTCTTGATAAACTATGTGCAAGGATGCCACCAggacaagaaaattttgtcatcATAGCCgatcttgaaggatggaaatATTCAAATAGTGACATTCGCGGGTATATGGGTGCTCTAAACATGTTGCAGGATTACTATCCGGAAAGATTGgggaaattttatattgttcatGCACCTTACATATTTATGACAGTATGGAAAATTGTCTACCCTTTCATCGACAACAAAACCAAGAAGAAGATAGTCTTTGTGGAGAACGACAGGCTGAAATCCACACTGATGGAAGAGATAGACGAGAGTCAGCTCCCAGAGATATATGGTGGTCAATTGCCTTTAGTCCCAATCCAGGACAGCTA 830 0.3976 MEALKAIINPRRSQLKSNEEALTCANKEAIISEVALDDCFLKNSTKTEQAKVRLVRSYVESKDPSAKEEDDQMIRRFLRARDLDIEKASAMFLKYLKWRHSFVPTGSISASEIPNELAQEKMFVQGFDNKGRPIGFVFGAKHFQSKDDPDEFKRFVIYVLDKLCARMPPGQENFVIIADLEGWKYSNSDIRGYMGALNMLQDYYPERLGKFYIVHAPYIFMTVWKIVYPFIDNKTKKKIVFVENDRLKSTLMEEIDESQLPEIYGGQLPLVPIQDS 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g01578 276 Pfam CRAL/TRIO domain 120 266 IPR001251 -
Bva06g01578 276 Gene3D - 6 275 IPR036865 -
Bva06g01578 276 SMART sec14_4 116 269 IPR001251 -
Bva06g01578 276 PANTHER POLYPHOSPHOINOSITIDE-BINDING PROTEIN 38 276 - -
Bva06g01578 276 SUPERFAMILY CRAL/TRIO N-terminal domain 41 104 IPR036273 -
Bva06g01578 276 PANTHER OS03G0850700 PROTEIN 38 276 - -
Bva06g01578 276 CDD SEC14 123 267 IPR001251 -
Bva06g01578 276 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 110 272 IPR001251 -
Bva06g01578 276 SUPERFAMILY CRAL/TRIO domain 112 269 IPR036865 -
Bva06g01578 276 SMART CRAL_TRIO_N_2 70 95 IPR011074 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g01578 Bva-Chr6 11287949 11292587 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g01578 76 262 Acyl Lipid Metabolism Gene Families AT5G47730 26.961 3.96e-15 72.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g01578 - - qsu:111997477 374.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g01578 06 11287949 11292587 Bva06g01578 06 11287949 11292587 ECH